Minimal continuum theories of structure formation in dense active fluids

被引:88
作者
Dunkel, Joern [1 ]
Heidenreich, Sebastian [2 ]
Baer, Markus [2 ]
Goldstein, Raymond E. [1 ]
机构
[1] Univ Cambridge, Ctr Math Sci, DAMTP, Cambridge CB3 0WA, England
[2] Phys Tech Bundesanstalt, D-10857 Berlin, Germany
基金
欧洲研究理事会;
关键词
COLLECTIVE BEHAVIOR; PHASE-TRANSITIONS; PATTERN-FORMATION; DYNAMICS; HYDRODYNAMICS; MICROORGANISMS; FLUCTUATIONS; MECHANICS; SYSTEMS; MOTION;
D O I
10.1088/1367-2630/15/4/045016
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Self-sustained dynamical phases of living matter can exhibit remarkable similarities over a wide range of scales, from mesoscopic vortex structures in microbial suspensions and motility assays of biopolymers to turbulent large-scale instabilities in flocks of birds or schools of fish. Here, we argue that, in many cases, the phenomenology of such active states can be efficiently described in terms of fourth- and higher-order partial differential equations. Structural transitions in these models can be interpreted as Landau-type kinematic transitions in Fourier (wavenumber) space, suggesting that microscopically different biological systems can share universal long-wavelength features. This general idea is illustrated through numerical simulations for two classes of continuum models for incompressible active fluids: a Swift-Hohenberg-type scalar field theory, and a minimal vector model that extends the classical Toner-Tu theory and appears to be a promising candidate for the quantitative description of dense bacterial suspensions. We discuss how microscopic symmetry-breaking mechanisms can enter macroscopic continuum descriptions of collective microbial motion near surfaces, and conclude by outlining future applications.
引用
收藏
页数:22
相关论文
共 77 条
[51]   Kardar-Parisi-Zhang asymptotics for the two-dimensional noisy Kuramoto-Sivashinsky equation [J].
Nicoli, Matteo ;
Vivo, Edoardo ;
Cuerno, Rodolfo .
PHYSICAL REVIEW E, 2010, 82 (04)
[52]   Collective Behaviour of Swimming Micro-organisms [J].
Pedley, T. J. .
EXPERIMENTAL MECHANICS, 2010, 50 (09) :1293-1301
[53]   Numerical validation of the complex Swift-Hohenberg equation for lasers [J].
Pedrosa, J. ;
Hoyuelos, M. ;
Martel, C. .
EUROPEAN PHYSICAL JOURNAL B, 2008, 66 (04) :525-530
[54]   Collective Motion and Nonequilibrium Cluster Formation in Colonies of Gliding Bacteria [J].
Peruani, Fernando ;
Starruss, Joern ;
Jakovljevic, Vladimir ;
Sogaard-Andersen, Lotte ;
Deutsch, Andreas ;
Baer, Markus .
PHYSICAL REVIEW LETTERS, 2012, 108 (09)
[55]   Nonlinear Field Equations for Aligning Self-Propelled Rods [J].
Peshkov, Anton ;
Aranson, Igor S. ;
Bertin, Eric ;
Chate, Hugues ;
Ginelli, Francesco .
PHYSICAL REVIEW LETTERS, 2012, 109 (26)
[56]   Resonant pattern formation in a chemical system [J].
Petrov, V ;
Ouyang, Q ;
Swinney, HL .
NATURE, 1997, 388 (6643) :655-657
[57]   Effective Viscosity of Microswimmer Suspensions [J].
Rafai, Salima ;
Jibuti, Levan ;
Peyla, Philippe .
PHYSICAL REVIEW LETTERS, 2010, 104 (09)
[58]   The Mechanics and Statistics of Active Matter [J].
Ramaswamy, Sriram .
ANNUAL REVIEW OF CONDENSED MATTER PHYSICS, VOL 1, 2010, 1 :323-345
[59]   A self-organized vortex array of hydrodynamically entrained sperm cells [J].
Riedel, IH ;
Kruse, K ;
Howard, J .
SCIENCE, 2005, 309 (5732) :300-303
[60]   Active Brownian particles From Individual to Collective Stochastic Dynamics [J].
Romanczuk, P. ;
Baer, M. ;
Ebeling, W. ;
Lindner, B. ;
Schimansky-Geier, L. .
EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS, 2012, 202 (01) :1-162