Folding perspectives of an intrinsically disordered transactivation domain and its single mutation breaking the folding propensity

被引:7
|
作者
Sharma, Nitin [1 ]
Fonin, Alexander, V [2 ]
Shpironok, Olesya G. [2 ]
Silonov, Sergey A. [2 ]
Turoverov, Konstantin K. [2 ,3 ]
Uversky, Vladimir N. [4 ,5 ,6 ]
Kuznetsova, Irina M. [2 ]
Giri, Rajanish [1 ,7 ]
机构
[1] Indian Inst Technol Mandi, Sch Basic Sci, Kamand 175005, Himachal Prades, India
[2] Russian Acad Sci, Inst Cytol, Lab Struct Dynam Stabil & Folding Prot, St Petersburg, Russia
[3] Peter Great St Petersburg Polytech Univ, Dept Biophys, Polytech Skaya Av 29, St Petersburg, Russia
[4] Univ S Florida, Dept Mol Med, Morsani Coll Med, Tampa, FL 33620 USA
[5] Univ S Florida, USF Hlth Byrd Alzheimers Res Inst, Morsani Coll Med, Tampa, FL 33620 USA
[6] Russian Acad Sci, Lab New Methods Biol, Inst Biol Instrumentat, Pushchino 142290, Moscow Region, Russia
[7] Indian Inst Technol Mandi, BioX Ctr, Vpo Kamand 175005, India
基金
俄罗斯基础研究基金会;
关键词
Intrinsically disordered proteins; Transactivation domain; PCET motif; MOLECULAR RECOGNITION FEATURES; EXCLUDED-VOLUME; KIX DOMAIN; LEUKEMIA INDUCTION; UNFOLDED PROTEINS; BINDING REGIONS; WEB SERVER; C-MYB; OSMOLYTES; SEQUENCE;
D O I
10.1016/j.ijbiomac.2019.11.111
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Transcriptional regulation is a critical facet of cellular development controlled by numerous transcription factors, among which are E-proteins (E2A, HEB, and E2-2) that play important roles in lymphopoiesis. For example, primary hematopoietic cells immortalisation is promoted by interaction of the conserved PCET motif consisting of the Leu-X-X-Leu-Leu (LXXLL) and Leu-Asp-Phe-Ser (LDFS) sequences of the transactivation domains (AD1) of E-proteins with the KIX domain of CBP/p300 transcriptional co-activators. Earlier, it was shown that the LXXLL motif is essential for the PCET-KIX interaction driven by the PCET helical transition. In this study, we analyzed the dehydration-driven gain of helicity in the conserved region (residues 11-28) of the AD1 domain of E-protein. Particularly, we showed that AD1 structure was dramatically affected by alcohols, but was insensitive to changes in pH or the presence of osmolytes sarcosine and taurine, or high polyethylene glycol (PEG) concentrations and DOPC Liposomes. These structure-forming effects of solvents were almost completely absent in the case of L21P AD1 mutant characterized by weakened interaction with KIX. This indicates that KIX interaction-induced AD1 ordering is driven by PCET motif dehydration. The L21P mutation-caused loss of molecular recognition function of AD1 is due to the mutation-induced disruption of the AD1 helical propensity. (C) 2019 Elsevier B.V. All rights reserved.
引用
收藏
页码:1359 / 1372
页数:14
相关论文
共 50 条
  • [1] Osmolyte-induced folding of an intrinsically disordered transactivation function domain of the Glucocorticoid Receptor
    Khan, Shagufta H.
    Kumar, Raj
    FASEB JOURNAL, 2011, 25
  • [2] Folding propensity of intrinsically disordered proteins by osmotic stress
    Mansouri, Amanda L.
    Grese, Laura N.
    Rowe, Erica L.
    Pino, James C.
    Chennubhotla, S. Chakra
    Ramanathan, Arvind
    O'Neill, Hugh M.
    Berthelier, Valerie
    Stanley, Christopher B.
    MOLECULAR BIOSYSTEMS, 2016, 12 (12) : 3695 - 3701
  • [3] Remarkably Fast Coupled Folding and Binding of the Intrinsically Disordered Transactivation Domain of cMyb to CBP KIX
    Shammas, Sarah L.
    Travis, Alexandra J.
    Clarke, Jane
    JOURNAL OF PHYSICAL CHEMISTRY B, 2013, 117 (42): : 13346 - 13356
  • [4] Assessing the Structural Ensemble and Folding Propensity of Intrinsically Disordered Proteins
    Stanley, Christopher B.
    Debuhr, Amanda
    Grese, Laura
    Rowe, Erica
    O'Neill, Hugh
    Berthelier, Valerie
    BIOPHYSICAL JOURNAL, 2012, 102 (03) : 630A - 631A
  • [5] Anchor Residues Govern Binding and Folding of an Intrinsically Disordered Domain
    Merritt, Haley I.
    Sawyer, Nicholas
    Watkins, Andrew M.
    Arora, Paramjit S.
    ACS CHEMICAL BIOLOGY, 2022, 17 (10) : 2723 - 2727
  • [6] Templated folding of intrinsically disordered proteins
    Toto, Angelo
    Malagrino, Francesca
    Visconti, Lorenzo
    Troilo, Francesca
    Pagano, Livia
    Brunori, Maurizio
    Jemth, Per
    Gianni, Stefano
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2020, 295 (19) : 6586 - 6593
  • [7] Umbrella sampling folding of intrinsically disordered proteins
    Dinner, Aaron
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 251
  • [8] Uncoupling the Folding and Binding of an Intrinsically Disordered Protein
    Poosapati, Anusha
    Gregory, Emily
    Borcherds, Wade M.
    Chemes, Lucia B.
    Daughdrill, Gary W.
    JOURNAL OF MOLECULAR BIOLOGY, 2018, 430 (16) : 2389 - 2402
  • [9] Leucine-rich hydrophobic clusters promote folding of the N-terminus of the intrinsically disordered transactivation domain of p53
    Michel Espinoza-Fonseca, L.
    FEBS LETTERS, 2009, 583 (03): : 556 - 560
  • [10] Osmolyte-Induced Folding of an Intrinsically Disordered Protein: Folding Mechanism in the Absence of Ligand
    Chang, Yu-Chu
    Oas, Terrence G.
    BIOCHEMISTRY, 2010, 49 (25) : 5086 - 5096