Bridging the gap between qualitative and quantitative colocalization results in fluorescence microscopy studies

被引:107
作者
Zinchuk, Vadim [1 ]
Wu, Yong [2 ]
Grossenbacher-Zinchuk, Olga [3 ]
机构
[1] Kochi Univ, Fac Med, Dept Anat & Cell Biol, Kochi 780, Japan
[2] Univ Calif Los Angeles, David Geffen Sch Med, Div Mol Med, Dept Anesthesiol, Los Angeles, CA 90095 USA
[3] Univ Fribourg, Fac Med, Unit Anat, CH-1700 Fribourg, Switzerland
关键词
BIOIMAGE INFORMATICS;
D O I
10.1038/srep01365
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Quantitative colocalization studies suffer from the lack of unified approach to interpret obtained results. We developed a tool to characterize the results of colocalization experiments in a way so that they are understandable and comparable both qualitatively and quantitatively. Employing a fuzzy system model and computer simulation, we produced a set of just five linguistic variables tied to the values of popular colocalization coefficients: "Very Weak'', "Weak'', "Moderate'', "Strong'', and "Very Strong''. The use of the variables ensures that the results of colocalization studies are properly reported, easily shared, and universally understood by all researchers working in the field. When new coefficients are introduced, their values can be readily fitted into the set.
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页数:5
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