Agonist and antagonist recognition studies for oestrogen receptor by molecular dynamics simulation

被引:9
|
作者
Li, Wen-Ming [1 ]
Li, Xiao-Bo [1 ]
Sun, Su-Xia [1 ]
Liang, Jing [1 ]
Wang, Run-Ling [1 ]
Wang, Shu-Qing [1 ]
机构
[1] Tianjin Med Univ, Sch Pharm, Tianjin Key Lab Technol Enabling Dev Clin Therape, Tianjin 300070, Peoples R China
基金
中国国家自然科学基金;
关键词
oestrogen receptor; agonist; antagonist; molecular dynamics simulation; BREAST-CANCER-CELLS; LINEAR CONSTRAINT SOLVER; PARTICLE MESH EWALD; MESSENGER-RNA; FORCE-FIELD; IN-VITRO; 4-HYDROXYTAMOXIFEN; BINDING; ALPHA; ANTIESTROGENS;
D O I
10.1080/08927022.2012.717281
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Oestrogen receptor (ER) is a ligand-activated transcription factor which plays an important role in many physiological processes. The aim of this study was to explore the difference between agonist and antagonist recognition mode. Molecular dynamics simulation of ER/diethylstilbestrol and ER/4-hydroxytamoxifen complexes was carried out. Our research results indicate that Glu353 participates in both agonist and antagonist recognition; His524 is the key residue in agonist recognition; Met343, Leu346, Thr347 and Asp351 are the key residues in the antagonist recognition.
引用
收藏
页码:228 / 233
页数:6
相关论文
共 50 条
  • [1] Molecular Recognition of Agonist and Antagonist for Peroxisome Proliferator-Activated Receptor-α Studied by Molecular Dynamics Simulations
    Liu, Mengyuan
    Wang, Lushan
    Zhao, Xian
    Sun, Xun
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2014, 15 (05) : 8743 - 8752
  • [2] Molecular docking and molecular dynamics simulation studies of GPR40 receptor-agonist interactions
    Lu, Shao-Yong
    Jiang, Yong-Jun
    Lv, Jing
    Wu, Tian-Xing
    Yu, Qing-Sen
    Zhu, Wei-Liang
    JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2010, 28 (08): : 766 - 774
  • [3] Receptor Dynamics in Molecular Recognition by Cryo-EM and Molecular Simulation
    Zhao, Yizhen
    Wang, He
    Zang, Yongjian
    Zhu, Xun
    Zhang, Shengli
    Zhang, Lei
    COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, 2021, 24 (10) : 1696 - 1701
  • [4] Structural Dynamics of Agonist and Antagonist Binding to the Androgen Receptor
    Singam, Ettayapuram Ramaprasad Azhagiya
    Tachachartvanich, Phum
    La Merrill, Michele A.
    Smith, Martyn T.
    Durkin, Kathleen A.
    JOURNAL OF PHYSICAL CHEMISTRY B, 2019, 123 (36): : 7657 - 7666
  • [5] Oestrogen-mediated cardioprotection following ischaemia and reperfusion is mimicked by an oestrogen receptor (ER)α agonist and unaffected by an ERβ antagonist
    Jeanes, Helen L.
    Tabor, Caroline
    Black, Darcey
    Ederveen, Antwan
    Gray, Gillian A.
    JOURNAL OF ENDOCRINOLOGY, 2008, 197 (03) : 493 - 501
  • [6] Characterizing the interaction modes of PAR4 receptor with agonist and antagonist by molecular simulation approach
    Lu, Nan
    Meng, Fancui
    Yuan, Jing
    Liu, Lei
    Wang, Yanshi
    Li, Lingjun
    Zhao, Tong
    Xu, Weiren
    Tang, Lida
    Xu, Youjun
    JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY, 2019, 18 (02):
  • [7] Study of a structurally similar kappa opioid receptor agonist and antagonist pair by molecular dynamics simulations
    Kolinski, Michal
    Filipek, Slawomir
    JOURNAL OF MOLECULAR MODELING, 2010, 16 (10) : 1567 - 1576
  • [8] Study of a structurally similar kappa opioid receptor agonist and antagonist pair by molecular dynamics simulations
    Michal Kolinski
    Slawomir Filipek
    Journal of Molecular Modeling, 2010, 16 : 1567 - 1576
  • [9] The selective β1-adrenoceptor antagonist nebivolol is a potential oestrogen receptor agonist with neuroprotective abilities
    Manthey, D.
    Gamerdinger, M.
    Behl, C.
    BRITISH JOURNAL OF PHARMACOLOGY, 2010, 159 (06) : 1264 - 1273
  • [10] Molecular dynamics simulation of the ligand binding domain of mGluR1 in response to agonist and antagonist binding
    Gabriele Costantino
    Antonio Macchiarulo
    Maxim Belenikin
    Roberto Pellicciari
    Journal of Computer-Aided Molecular Design, 2002, 16 : 779 - 784