Discrimination of urinary tract infection pathogens by means of their growth profiles using surface enhanced Raman scattering

被引:26
作者
Avci, Ertug [1 ]
Kaya, Nur Selin [1 ]
Ucankus, Gizem [1 ]
Culha, Mustafa [1 ]
机构
[1] Yeditepe Univ, Fac Engn & Architecture, Dept Genet & Bioengn, TR-34755 Istanbul, Turkey
关键词
Urinary tract infection; Bacteria; Growth phase; Surface-enhanced Raman scattering; Principal component analysis; SERS DETECTION; CELL-WALL; BACTERIA; IDENTIFICATION; SPECTROSCOPY; SPECTRA; PROTEIN; MICROORGANISMS; REDUCTION; DIAGNOSIS;
D O I
10.1007/s00216-015-8950-5
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Urinary tract infection (UTI) is a widespread infection and affects millions of people around the globe. The gold standard for identification of microorganisms causing infection is urine culture. However, current methods require at least 24 h for the results. In clinical settings, identification and discrimination of bacteria with less time-consuming and cheaper methods are highly desired. In recent years, the power of surface-enhanced Raman scattering (SERS) for fast identification of bacteria and biomolecules has been demonstrated. In this study, we show discrimination of urinary tract infection causative pathogens within 1 h of incubation using principal component analysis (PCA) of SERS spectra of seven different UTI causative bacterial species. In addition, we showed differentiation of them at their different growth phases. We also analyzed origins of bacterial SERS spectra and demonstrated the highly dynamic structure of the bacteria cell wall during their growth.
引用
收藏
页码:8233 / 8241
页数:9
相关论文
共 49 条
  • [1] Influence of Protein Size on Surface-Enhanced Raman Scattering (SERS) Spectra in Binary Protein Mixtures
    Avci, Ertug
    Culha, Mustafa
    [J]. APPLIED SPECTROSCOPY, 2014, 68 (08) : 890 - 899
  • [2] Urinary Tract Infections: Current and Emerging Management Strategies
    Barber, Amelia E.
    Norton, J. Paul
    Spivak, Adam M.
    Mulvey, Matthew A.
    [J]. CLINICAL INFECTIOUS DISEASES, 2013, 57 (05) : 719 - 724
  • [3] Combined spectroscopic and topographic characterization of nanoscale domains and their distributions of a redox protein on bacterial cell surfaces
    Biju, Vasudevanpillai
    Pan, Duohai
    Gorby, Yuri A.
    Fredrickson, Jim
    McLean, Jeff
    Saffarini, Daad
    Lu, H. Peter
    [J]. LANGMUIR, 2007, 23 (03) : 1333 - 1338
  • [4] Multiplex identification of bacteria in bacterial mixtures with surface-enhanced Raman scattering
    Cam, Dilek
    Keseroglu, Kemal
    Kahraman, Mehmet
    Sahin, Fikrettin
    Culha, Mustafa
    [J]. JOURNAL OF RAMAN SPECTROSCOPY, 2010, 41 (05) : 484 - 489
  • [5] Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram- positive bacteria
    Carlson, Hans K.
    Iavarone, Anthony T.
    Gorur, Amita
    Yeo, Boon Siang
    Tran, Rosalie
    Melnyk, Ryan A.
    Mathies, Richard A.
    Auer, Manfred
    Coates, John D.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (05) : 1702 - 1707
  • [6] Rapid identification of bacteria and yeast using surface-enhanced Raman scattering
    Culha, Mustafa
    Kahraman, Mehmet
    Cam, Dilek
    Sayin, Ismail
    Keseroglu, Kemal
    [J]. SURFACE AND INTERFACE ANALYSIS, 2010, 42 (6-7) : 462 - 465
  • [7] Urinary Tract Infections in Women
    Dielubanza, Elodi J.
    Schaeffer, Anthony J.
    [J]. MEDICAL CLINICS OF NORTH AMERICA, 2011, 95 (01) : 27 - +
  • [8] Understanding SERS of bacteria
    Efrima, S.
    Zeiri, L.
    [J]. JOURNAL OF RAMAN SPECTROSCOPY, 2009, 40 (03) : 277 - 288
  • [9] Rapid method for direct identification of bacteria in urine and blood culture samples by matrix-assisted laser desorption ionization time-of-flight mass spectrometry: intact cell vs. extraction method
    Ferreira, L.
    Sanchez-Juanes, F.
    Munoz-Bellido, J. L.
    Gonzalez-Buitrago, J. M.
    [J]. CLINICAL MICROBIOLOGY AND INFECTION, 2011, 17 (07) : 1007 - 1012
  • [10] Broad Identification of Bacterial Type in Urinary Tract Infection Using 1H NMR Spectroscopy
    Gupta, Ashish
    Dwivedi, Mayank
    Mahdi, Abbas Ali
    Khetrapal, Chunni Lal
    Bhandari, Mahendra
    [J]. JOURNAL OF PROTEOME RESEARCH, 2012, 11 (03) : 1844 - 1854