Variable selection for high-dimensional partly linear additive Cox model with application to Alzheimer's disease

被引:23
|
作者
Wu, Qiwei [1 ]
Zhao, Hui [2 ]
Zhu, Liang [3 ]
Sun, Jianguo [4 ]
机构
[1] Eli Lilly & Co, Indianapolis, IN 46285 USA
[2] Zhongnan Univ Econ & Law, Sch Stat & Math, Wuhan 430073, Peoples R China
[3] Univ Texas Hlth Sci Ctr Houston, Dept Internal Med, Div Clin & Translat Sci, Houston, TX 77030 USA
[4] Univ Missouri, Dept Stat, Columbia, MO 65211 USA
基金
美国国家卫生研究院; 加拿大健康研究院;
关键词
Bernstein polynomials; high-dimensional variable selection; interval-censored data; partly linear additive Cox model; Sieve estimation; PROPORTIONAL HAZARDS MODEL; GENOME-WIDE ASSOCIATION; REGRESSION; LASSO; LIKELIHOOD;
D O I
10.1002/sim.8594
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Variable selection has been discussed under many contexts and especially, a large literature has been established for the analysis of right-censored failure time data. In this article, we discuss an interval-censored failure time situation where there exist two sets of covariates with one being low-dimensional and having possible nonlinear effects and the other being high-dimensional. For the problem, we present a penalized estimation procedure for simultaneous variable selection and estimation, and in the method, Bernstein polynomials are used to approximate the involved nonlinear functions. Furthermore, for implementation, a coordinate-wise optimization algorithm, which can accommodate most commonly used penalty functions, is developed. A numerical study is performed for the evaluation of the proposed approach and suggests that it works well in practical situations. Finally the method is applied to an Alzheimer's disease study that motivated this investigation.
引用
收藏
页码:3120 / 3134
页数:15
相关论文
共 50 条
  • [1] Variable selection for high-dimensional quadratic Cox model with application to Alzheimer's disease
    Li, Cong
    Sun, Jianguo
    INTERNATIONAL JOURNAL OF BIOSTATISTICS, 2020, 16 (02)
  • [2] Variable selection in high-dimensional partly linear additive models
    Lian, Heng
    JOURNAL OF NONPARAMETRIC STATISTICS, 2012, 24 (04) : 825 - 839
  • [3] Variable Selection for High-dimensional Cox Model with Error Rate Control
    He, Baihua
    Shi, Hongwei
    Guo, Xu
    Zou, Changliang
    Zhu, Lixing
    JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 2024,
  • [4] An Additive Sparse Penalty for Variable Selection in High-Dimensional Linear Regression Model
    Lee, Sangin
    COMMUNICATIONS FOR STATISTICAL APPLICATIONS AND METHODS, 2015, 22 (02) : 147 - 157
  • [5] GREEDY VARIABLE SELECTION FOR HIGH-DIMENSIONAL COX MODELS
    Lin, Chien-Tong
    Cheng, Yu-Jen
    Ing, Ching-Kang
    STATISTICA SINICA, 2023, 33 : 1697 - 1719
  • [6] Group selection in high-dimensional partially linear additive models
    Wei, Fengrong
    BRAZILIAN JOURNAL OF PROBABILITY AND STATISTICS, 2012, 26 (03) : 219 - 243
  • [7] HIGH-DIMENSIONAL VARIABLE SELECTION
    Wasserman, Larry
    Roeder, Kathryn
    ANNALS OF STATISTICS, 2009, 37 (5A) : 2178 - 2201
  • [8] Variable selection for high-dimensional generalized linear model with block-missing data
    He, Yifan
    Feng, Yang
    Song, Xinyuan
    SCANDINAVIAN JOURNAL OF STATISTICS, 2023, 50 (03) : 1279 - 1297
  • [9] A sparse additive model for high-dimensional interactions with an exposure variable
    Bhatnagar, Sahir R.
    Lu, Tianyuan
    Lovato, Amanda
    Olds, David L.
    Kobor, Michael S.
    Meaney, Michael J.
    O'Donnell, Kieran
    Yang, Archer Y.
    Greenwood, Celia M. T.
    COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2023, 179
  • [10] Variable selection for nonparametric additive Cox model with interval-censored data
    Tian, Tian
    Sun, Jianguo
    BIOMETRICAL JOURNAL, 2023, 65 (01)