Planococcus versutus sp nov., isolated from soil

被引:16
作者
See-Too, Wah-Seng [1 ,2 ]
Ee, Robson [1 ]
Madhaiyan, Munusamy [3 ]
Kwon, Soon-Wo [4 ]
Tan, Jia Yi [1 ]
Lim, Yan Lue [1 ]
Convey, Peter [2 ,5 ]
Pearce, David A. [2 ,5 ,6 ]
Yin, Wai Fong [1 ]
Chan, Kok-Gan [1 ,7 ]
机构
[1] Univ Malaya, Inst Biol Sci, Div Genet & Mol Biol, Fac Sci, Kuala Lumpur, Malaysia
[2] Univ Malaya, Inst Postgrad Studies, NARC, Kuala Lumpur 50603, Malaysia
[3] Natl Univ Singapore, Temasek Lifesci Lab, 1 Res Link, Singapore 117604, Singapore
[4] Natl Acad Agr Sci, Natl Agrobiodivers Ctr, Suwon 441707, South Korea
[5] British Antarctic Survey, NERC, Madingley Rd, Cambridge CB3 0ET, England
[6] Univ Northumbria, Fac Hlth & Life Sci, Newcastle Upon Tyne NE1 8ST, Tyne & Wear, England
[7] Univ Malaya, UM Omics Ctr, Kuala Lumpur, Malaysia
关键词
Planococcus versutus; quorum quenching; Antarctic soil; GENOME SEQUENCE; PLANOMICROBIUM; PSYCHROPHILUS; ANTARCTICUS; SEDIMENT;
D O I
10.1099/ijsem.0.001721
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A taxonomic study was performed on a novel Gram-stain-positive, coccus-shaped, orange-pigmented motile bacterium, designated as strain L10.15(T). The organism was isolated from a soil sample collected in Lagoon Island (close to Adelaide Island, western Antarctic Peninsula) using a quorum-quenching enrichment medium. Growth occurred at 4-30 degrees C, pH 6-11 and at moderately high salinity (0-15 %, w/v, NaCl), with optimal growth at 26 degrees C, at pH 7-8 and with 6% (w/v) NaCl. 16S rRNA gene sequence analysis showed that strain L10.15(T) belonged to the genus Planococcus and was closely related to Planococcus halocryophilus Or1(T) (99.3% similarity), Planococcus donghaensis Or1(T) (99.0 %), Planococcus antarcticus DSM 14505(T) (98.3 %), Planococcus plakortidis AS/ASP6 (II)(T) (97.6 %), Planococcus maritimus TF-9(T) (97.5 %), Planococcus salinarum ISL-6(T) (97.5 %) and Planococcus kocurii NCIMB 629(T) (97.5 %). However, the average nucleotide identity-MUMmer analysis showed low genomic relatedness values of 71.1-81.7% to the type strains of these closely related species of the genus Planococcus. The principal fatty acids were anteiso-C-15:0, C-16:1 omega 7c and anteiso-C-17: 0,C- and the major menaquinones of strain L10.15(T) were MK-5 (48 %), MK-6 (6 %) and MK-7 (44 %). Polar lipid analysis revealed the presence of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and aminophospholipid. The DNA G+C content was 39.4 mol%. The phenotypic and genotypic data indicate that strain L10.15 T represents a novel species of the genus Planococcus, for which the name Planococcus versutus sp. nov. is proposed. The type strain is L10.15(T) (= DSM 101994(T)=KACC 18918(T)).
引用
收藏
页码:944 / 950
页数:7
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