PHYLOGENETIC ANALYSIS AND SYSTEMATIC REVISION OF REMIPEDIA (NECTIOPODA) FROM BAYESIAN ANALYSIS OF MOLECULAR DATA

被引:30
作者
Hoenemann, Mario
Neiber, Marco T. [1 ]
Humphreys, William F. [2 ,3 ,4 ]
Iliffe, Thomas M. [5 ]
Li, Difei [6 ]
Schram, Frederick R. [7 ]
Koenemann, Stefan [8 ]
机构
[1] Univ Hamburg, Zool Museum, D-20146 Hamburg, Germany
[2] Western Australian Museum, Dept Terr Zool, Welshpool Dc, WA 6986, Australia
[3] Univ Adelaide, Sch Earth & Environm Sci, Adelaide, SA 5005, Australia
[4] Univ Western Australia, Sch Anim Biol, Nedlands, WA 6907, Australia
[5] Texas A&M Univ, Dept Marine Biol, Galveston, TX 77553 USA
[6] Univ Vet Med Hannover, Inst Zool, D-30559 Hannover, Germany
[7] Univ Washington, Burke Museum Nat Hist, Seattle, WA 98195 USA
[8] Montessori Educ House Hannover, D-30173 Hannover, Germany
基金
美国国家科学基金会;
关键词
Bayesian phylogeny; molecular taxonomy; structural alignment; NEW-SPECIES REMIPEDIA; SAN-SALVADOR ISLAND; ANCHIALINE CAVES; POSTEMBRYONIC DEVELOPMENT; PANCRUSTACEAN PHYLOGENY; NUCLEOTIDE SUBSTITUTION; WESTERN-AUSTRALIA; SURFACE-WATER; CRUSTACEA; SPELEONECTIDAE;
D O I
10.1163/1937240X-00002179
中图分类号
Q17 [水生生物学];
学科分类号
071004 ;
摘要
We performed a phylogenetic analysis of the crustacean class Remipedia. For this purpose, we generated sequences of three different molecular markers, 16S rRNA (16S), histone 3 (H3), and cytochrome c oxidase subunit I (COI). The analyses included sequences from 20 of the 27 recent species of Remipedia, plus four still-undescribed species. The data matrix was complemented with sequences from online databases (The European Molecular Biology Laboratory and GenBan (R)). Campodea tillyardi (Diplura), Hutchinsoniella macracantha (Cephalocarida), Penaeus monodon (Malacostraca) and Branchinella occidentalis (Branchiopoda) served as out-groups. In addition to the classic computer-based alignment methods used for protein-coding markers (H3 and COI), an alternative approach combining structural alignment and manual optimization was used for 16S. The results of our analyses uncovered several inconsistencies with the current taxonomic classification of Remipedia. Godzilliidae and the genera Speleonectes and Lasionectes are polyphyletic, while Speleonectidae emerges as a paraphyletic group. We discuss current taxonomic diagnoses based on morphologic characters, and suggest a taxonomic revision that accords with the topologies of the phylogenetic analyses. Three new families (Kumongidae, Pleomothridae, and Cryptocorynetidae) as well as three new genera (Kumonga, Angirasu, and Xibalbanus) are erected. The family Morlockiidae and the genus Morlockia are removed from synonymy and returned to separate status.
引用
收藏
页码:603 / 619
页数:17
相关论文
共 101 条
  • [81] STOCK J H, 1976, Bijdragen tot de Dierkunde, V46, P47
  • [82] Swindell S R, 1997, Methods Mol Biol, V70, P75, DOI 10.1385/0-89603-358-9:75
  • [83] Swofford D., 1993, PAUP: Phylogenetic Analysis Using Parsimony
  • [84] Thiede J., 1979, GEOJOURNAL, V3, P263
  • [85] Pancrustacean Phylogeny in the Light of New Phylogenomic Data: Support for Remipedia as the Possible Sister Group of Hexapoda
    von Reumont, Bjoern M.
    Jenner, Ronald A.
    Wills, Matthew A.
    Dell'Ampio, Emiliano
    Pass, Guenther
    Ebersberger, Ingo
    Meyer, Benjamin
    Koenemann, Stefan
    Iliffe, Thomas M.
    Stamatakis, Alexandros
    Niehuis, Oliver
    Meusemann, Karen
    Misof, Bernhard
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2012, 29 (03) : 1031 - 1045
  • [86] Drawn to the dark side: A molecular phylogeny of freshwater shrimps (Crustacea: Decapoda: Caridea: Atyidae) reveals frequent cave invasions and challenges current taxonomic hypotheses
    von Rintelen, Kristina
    Page, Timothy J.
    Cai, Yixiong
    Roe, Kevin
    Stelbrink, Bjoern
    Kuhajda, Bernard R.
    Iliffe, Thomas M.
    Hughes, Jane
    von Rintelen, Thomas
    [J]. MOLECULAR PHYLOGENETICS AND EVOLUTION, 2012, 63 (01) : 82 - 96
  • [87] WAGELE JW, 1985, STYGOLOGIA, V1, P258
  • [88] WAGNER H. P., 1994, ZOOLOGISCHE VERHANDE, V291, P1
  • [89] Wheeler WC, 2004, ASSEMBLING THE TREE OF LIFE, P281
  • [90] Wills M.A., 1997, ARTHROPOD RELATIONSH, P189