Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma

被引:13
作者
Ferguson, Elaine A. [1 ]
Matthiopoulos, Jason [1 ]
Insall, Robert H. [3 ]
Husmeier, Dirk [2 ]
机构
[1] Coll Med Vet & Life Sci, Inst Biodivers Anim Hlth & Comparat Med, Glasgow, Lanark, Scotland
[2] Univ Glasgow, Coll Sci & Engn, Sch Math & Stat, Glasgow, Lanark, Scotland
[3] Canc Res UK Beatson Inst, Glasgow, Lanark, Scotland
基金
英国工程与自然科学研究理事会;
关键词
advection-diffusion-reaction; self-generated gradients; collective cell movement; model selection; bootstrapping; widely applicable information criterion; NEGATIVE CHEMOTAXIS; MODEL SELECTION; MIGRATION; MACROPINOCYTOSIS; DISCOIDEUM; GRADIENTS; TISSUE;
D O I
10.1098/rsif.2016.0695
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Collective cell movement is a key component of many important biological processes, including wound healing, the immune response and the spread of cancers. To understand and influence these movements, we need to be able to identify and quantify the contribution of their different underlying mechanisms. Here, we define a set of six candidate models-formulated as advection-diffusion-reaction partial differential equations-that incorporate a range of cell movement drivers. We fitted these models to movement assay data from two different cell types: Dictyostelium discoideum and human melanoma. Model comparison using widely applicable information criterion suggested that movement in both of our study systems was driven primarily by a self-generated gradient in the concentration of a depletable chemical in the cells' environment. For melanoma, there was also evidence that overcrowding influenced movement. These applications of model inference to determine the most likely drivers of cell movement indicate that such statistical techniques have potential to support targeted experimental work in increasing our understanding of collective cell movement in a range of systems.
引用
收藏
页数:11
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