An orthogonal seryl-tRNA synthetase/tRNA pair for noncanonical amino acid mutagenesis in Escherichia coli!

被引:13
作者
Zambaldo, Claudio [1 ,2 ]
Koh, Minseob [1 ,2 ]
Nasertorabi, Fariborz [3 ,4 ]
Han, Gye Won [3 ,4 ]
Chatterjee, Abhishek [5 ]
Stevens, Raymond C. [3 ,4 ]
Schultz, Peter G. [1 ,2 ]
机构
[1] Scripps Res Inst, Dept Chem, 10550 N Torrey Pines Rd, La Jolla, CA 92037 USA
[2] Scripps Res Inst, Skaggs Inst Chem Biol, 10550 N Torrey Pines Rd, La Jolla, CA 92037 USA
[3] Univ Southern Calif, Michelson Ctr Convergent Biosci, Bridge Inst, Dept Biol Sci, Los Angeles, CA 90089 USA
[4] Univ Southern Calif, Michelson Ctr Convergent Biosci, Bridge Inst, Dept Chem, Los Angeles, CA 90089 USA
[5] Boston Coll, Dept Chem, 2609 Beacon St,246B Merkert Chem Ctr, Chestnut Hill, MA 02467 USA
关键词
Seryl-tRNA synthetase; E. coli orthogonality; Genetic code expansion; X-ray crystallography; Non-canonical amino acids; GENETIC-CODE; CRYSTAL-STRUCTURE; THERMUS-THERMOPHILUS; EVOLUTION; AMBER; DISCRIMINATION; PHOSPHOSERINE; MULTIPLE; REVEALS;
D O I
10.1016/j.bmc.2020.115662
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We report the development of the orthogonal amber-suppressor pair Archaeoglobus fulgidus seryl-tRNA (Af-tRNA(Ser))/Methanosarcina mazei seryl-tRNA synthetase (MmSerRS) in Escherichia coli. Furthermore, the crystal structure of MmSerRS was solved at 1.45 angstrom resolution, which should enable structure-guided engineering of its active site to genetically encode small, polar noncanonical amino acids (ncAAs).
引用
收藏
页数:5
相关论文
共 50 条
  • [41] Transforming a Pair of Orthogonal tRNA-aminoacyl-tRNA Synthetase from Archaea to Function in Mammalian Cells
    Thibodeaux, Gabrielle Nina
    Liang, Xiang
    Moncivais, Kathryn
    Umeda, Aiko
    Singer, Oded
    Alfonta, Lital
    Zhang, Zhiwen Jonathan
    PLOS ONE, 2010, 5 (06):
  • [42] Seryl-tRNA synthetase is involved in methionine stimulation of β-casein synthesis in bovine mammary epithelial cells
    Dai, Wenting
    Zhao, Fengqi
    Liu, Jianxin
    Liu, Hongyun
    BRITISH JOURNAL OF NUTRITION, 2020, 123 (05) : 489 - 498
  • [43] Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis
    Jewel, Delilah
    Kelemen, Rachel E.
    Huang, Rachel L.
    Zhu, Zeyu
    Sundaresh, Bharathi
    Malley, Kaitlin
    Pham, Quan
    Loynd, Conor
    Huang, Zeyi
    van Opijnen, Tim
    Chatterjee, Abhishek
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2024, 63 (09)
  • [44] Characterization of yeast seryl-tRNA synthetase active site mutants with improved discrimination against substrate analogues
    Landeka, I
    Filipic-Rocak, S
    Zinic, B
    Weygand-Durasevic, I
    BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 2000, 1480 (1-2): : 160 - 170
  • [45] The proximal region of a noncatalytic eukaryotic seryl-tRNA synthetase extension is required for protein stability in vitro and in vivo
    Mocibob, Marko
    Weygand-Durasevic, Ivana
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2008, 470 (02) : 129 - 138
  • [46] Asymmetric Amino Acid Activation by Class II Histidyl-tRNA Synthetase from Escherichia coli
    Guth, Ethan
    Farris, Mindy
    Bovee, Michael
    Francklyn, Christopher S.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (31) : 20753 - 20762
  • [47] Structure of the unusual seryl-tRNA synthetase reveals a distinct zinc-dependent mode of substrate recognition
    Bilokapic, Silvija
    Maier, Timm
    Ahel, Dragana
    Gruic-Sovulj, Ita
    Soell, Dieter
    Weygand-Durasevic, Ivana
    Ban, Nenad
    EMBO JOURNAL, 2006, 25 (11) : 2498 - 2509
  • [48] The unusual methanogenic seryl-tRNA synthetase recognizes tRNASer species from all three kingdoms of life
    Bilokapic, S
    Korencic, D
    Söll, D
    Weygand-Durasevic, I
    EUROPEAN JOURNAL OF BIOCHEMISTRY, 2004, 271 (04): : 694 - 702
  • [49] Idiosyncratic Helix-Turn-Helix Motif in Methanosarcina barkeri Seryl-tRNA Synthetase Has a Critical Architectural Role
    Bilokapic, Silvija
    Ivic, Nives
    Godinic-Mikulcic, Vlatka
    Piantanida, Ivo
    Ban, Nenad
    Weygand-Durasevic, Ivana
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (16) : 10706 - 10713
  • [50] Splicing Defect in Mitochondrial Seryl-tRNA Synthetase Gene Causes Progressive Spastic Paresis Instead of HUPRA Syndrome
    Linnankivi, Tarja
    Neupane, Nirajan
    Richter, Uwe
    Isohanni, Pirjo
    Tyynismaa, Henna
    HUMAN MUTATION, 2016, 37 (09) : 884 - 888