Prevalence of respiratory adenovirus species B and C in sewage sludge

被引：21

作者：

Bibby, Kyle ^{[1
]}

Peccia, Jordan ^{[1
]}

机构：

[1] Yale Univ, New Haven, CT 06511 USA

来源：

ENVIRONMENTAL SCIENCE-PROCESSES & IMPACTS | 2013年 / 15卷 / 02期

关键词：

ENTERIC VIRUSES; WASTE-WATER; ENVIRONMENTAL-SAMPLES; PCR ASSAYS; IDENTIFICATION; INDICATORS; BIOSOLIDS;

D O I：

10.1039/c2em30831b

中图分类号：

O65 [分析化学];

学科分类号：

070302 ; 081704 ;

摘要：

Human adenovirus diversity in sewage sludge was assessed by Ion Torrent sequencing and annotation of partial adenovirus hexon genes. The most abundant species identified were HAdV-C (average 78%) and -B (average 20%), which are associated with respiratory infections. These findings reinforce the necessity to consider aerosol exposure to sewage-derived pathogens.

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页码：336 / 338

页数：3

相关论文

共 27 条

[1] Occurrence of adenovirus and other enteric viruses in limited-contact freshwater recreational areas and bathing waters [J].

Aslan, A. ;

Xagoraraki, I. ;

Simmons, F. J. ;

Rose, J. B. ;

Dorevitch, S. .

JOURNAL OF APPLIED MICROBIOLOGY, 2011, 111 (05) :1250-1261

[2] Viral metagenome analysis to guide human pathogen monitoring in environmental samples [J].

Bibby, K. ;

Viau, E. ;

Peccia, J. .

LETTERS IN APPLIED MICROBIOLOGY, 2011, 52 (04) :386-392

[3] The Ribosomal Database Project: improved alignments and new tools for rRNA analysis [J].

Cole, J. R. ;

Wang, Q. ;

Cardenas, E. ;

Fish, J. ;

Chai, B. ;

Farris, R. J. ;

Kulam-Syed-Mohideen, A. S. ;

McGarrell, D. M. ;

Marsh, T. ;

Garrity, G. M. ;

Tiedje, J. M. .

NUCLEIC ACIDS RESEARCH, 2009, 37 :D141-D145

[4]

Cooper RJ, 1999, INVEST OPHTH VIS SCI, V40, P90

[5] SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data [J].

Cox, Murray P. ;

Peterson, Daniel A. ;

Biggs, Patrick J. .

BMC BIOINFORMATICS, 2010, 11

[6] Analysis of 15 adenovirus hexon proteins reveals the location and structure of seven hypervariable regions containing serotype-specific residues [J].

CrawfordMiksza, L ;

Schnurr, DP .

JOURNAL OF VIROLOGY, 1996, 70 (03) :1836-1844

[7]

Elnifro EM, 2000, J CLIN MICROBIOL, V38, P2055

[8] Quantitative Detection of Human Adenoviruses in Wastewater and Combined Sewer Overflows Influencing a Michigan River [J].

Fong, Theng-Theng ;

Phanikumar, Mantha S. ;

Xagoraraki, Irene ;

Rose, Joan B. .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2010, 76 (03) :715-723

[9] Genotype prevalence and risk factors for severe clinical adenovirus infection, united states 2004-2006 [J].

Gray, Gregory C. ;

McCarthy, Troy ;

Lebeck, Mark G. ;

Schnurr, David P. ;

Russell, Kevin L. ;

Kajon, Adriana E. ;

Landry, Marie L. ;

Leland, Diane S. ;

Storch, Gregory A. ;

Ginocchio, Christine C. ;

Robinson, Christine C. ;

Demmler, Gail J. ;

Saubolle, Michael A. ;

Kehl, Sue C. ;

Selvarangan, Rangaraj ;

Miller, Melissa B. ;

Chappell, James D. ;

Zerr, Danielle M. ;

Kiska, Deanna L. ;

Halstead, Diane C. ;

Capuano, Ana W. ;

Setterquist, Sharon F. ;

Chorazy, Margaret L. ;

Dawson, Jeffrey D. ;

Erdman, Dean D. .

CLINICAL INFECTIOUS DISEASES, 2007, 45 (09) :1120-1131

[10] Human Adenoviruses in water: Occurrence and health implications: A critical review [J].

Jiang, Sunny C. .

ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2006, 40 (23) :7132-7140