Crystal structure of Ruminococcus albus cellobiose 2-epimerase: Structural insights into epimerization of unmodified sugar

被引:38
作者
Fujiwara, Takaaki [1 ]
Saburi, Wataru [2 ]
Inoue, Sota [3 ]
Mori, Haruhide [2 ]
Matsui, Hirokazu [2 ]
Tanaka, Isao [1 ,4 ]
Yao, Min [1 ,4 ]
机构
[1] Hokkaido Univ, Grad Sch Life Sci, Kita Ku, Sapporo, Hokkaido 0600810, Japan
[2] Hokkaido Univ, Res Fac Agr, Kita Ku, Sapporo, Hokkaido 0608589, Japan
[3] Hokkaido Univ, Grad Sch Agr, Kita Ku, Sapporo, Hokkaido 0608589, Japan
[4] Hokkaido Univ, Fac Adv Life Sci, Kita Ku, Sapporo, Hokkaido 0600810, Japan
基金
日本学术振兴会;
关键词
X-ray crystallography; Cellobiose; 2-epimerase; Deprotonation; Unmodified sugar; Structure; CLONING; ENZYME; EPILACTOSE; GENE; 3-EPIMERASE; METABOLISM; ABSORPTION; BACTERIUM; RESIDUES; PATHWAY;
D O I
10.1016/j.febslet.2013.02.007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Enzymatic epimerization is an important modification for carbohydrates to acquire diverse functions attributable to their stereoisomers. Cellobiose 2-epimerase (CE) catalyzes interconversion between D-glucose and D-mannose residues at the reducing end of beta-1,4-linked oligosaccharides. Here, we solved the structure of Ruminococcus albus CE (RaCE). The structure of RaCE showed strong similarity to those of N-acetyl-D-glucosamine 2-epimerase and aldose-ketose isomerase YihS with a high degree of conservation of residues around the catalytic center, although sequence identity between them is low. Based on structural comparison, we found that His184 is required for RaCE activity as the third histidine added to two essential histidines in other sugar epimerases/isomerases. This finding was confirmed by mutagenesis, suggesting a new catalytic mechanism for CE involving three histidines. Structured summary of protein interactions: RaCE and X-ray crystallography (View interaction) (C) 2013 Federation of European Biochemical Societies. Published by Elsevier B. V. All rights reserved.
引用
收藏
页码:840 / 846
页数:7
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