Soil bacterial communities and ecosystem functioning change more strongly with season than habitat in a restored floodplain

被引:26
作者
Samaritani, Emanuela [1 ,2 ,3 ]
Mitchell, Edward A. D. [1 ,4 ]
Rich, Jeremy [3 ]
Shrestha, Juna [5 ]
Fournier, Bertrand [6 ]
Frey, Beat [5 ]
机构
[1] Univ Neuchatel, Lab Soil Biodivers, Rue Emile Argand 11, CH-2000 Neuchatel, Switzerland
[2] Swiss Fed Res Inst, WSL, CH-1015 Lausanne, Switzerland
[3] Brown Univ, Dept Ecol & Evolut Biol, Providence, RI 02912 USA
[4] Jardin Botan Neuchatel, Chemin Perthuis Sault 58, CH-2000 Neuchatel, Switzerland
[5] WSL Swiss Fed Res Inst, Zurcherstr 111, CH-8903 Birmensdorf, Switzerland
[6] Concordia Univ, Dept Biol, 7141 Sherbrooke St West, Montreal, PQ H4B 1R6, Canada
基金
瑞士国家科学基金会;
关键词
Floodplain; River restoration; Soil microbial diversity; T-RFLP profiling; Ecosystem functioning; FRAGMENT-LENGTH-POLYMORPHISM; RIVER-GROUNDWATER INTERACTIONS; TOTAL MICROBIAL ACTIVITY; EXTRACTION METHOD; FOOD WEBS; DIVERSITY; BIOMASS; LITTER; HETEROGENEITY; RHIZOSPHERE;
D O I
10.1016/j.apsoil.2016.12.010
中图分类号
S15 [土壤学];
学科分类号
0903 ; 090301 ;
摘要
Soil bacterial community structures and associated ecosystem functions are known to vary both in space and time but spatial and temporal patterns are rarely studied simultaneously. Dynamic floodplains offer an ideal setting to study these spatio-temporal patterns and to determine the relative importance of habitat diversity and seasons in shaping soil bacterial communities. We studied the differences between habitats and seasonal patterns of soil bacterial communities (TRFLPs) and soil environmental conditions (temperature, moisture and time elapsed since last inundation) and ecosystem functioning proxies (basal respiration, enzymatic activity, microbial C and N) over one year in seven habitats of a restored floodplain. Soil bacterial community structures in the two habitats closest to the river were most divergent from the others. However, although bacterial community structures differed between habitats at all sampling times, their seasonal variability was substantially higher than the habitat differences. Most of the ecosystem functioning proxies were lowest in the most dynamic habitat (gravel bar). Furthermore, while both bacterial community structure and ecosystem functions varied in relation to environmental conditions, the two Were not directly correlated, and the link between communities and functions was seasonally inconsistent. The ratio of seasonal vs. habitat variability of soil bacterial communities decreased from the most dynamic to the most stable (forest) habitat. Thus in dynamic ecosystems such as floodplains also external factors (flood disturbance, seasonally changing climatic conditions) might influence ecosystem functions and bacterial communities independently- possibly because of species functional redundancy- and are keys in maintaining floodplain taxonomical and functional diversity. (C) 2017 Elsevier B.V. All rights reserved.
引用
收藏
页码:71 / 78
页数:8
相关论文
共 78 条
  • [51] Multivariate analyses in microbial ecology
    Ramette, Alban
    [J]. FEMS MICROBIOLOGY ECOLOGY, 2007, 62 (02) : 142 - 160
  • [52] Seasonality and resource availability control bacterial and archaeal communities in soils of a temperate beech forest
    Rasche, Frank
    Knapp, Daniela
    Kaiser, Christina
    Koranda, Marianne
    Kitzler, Barbara
    Zechmeister-Boltenstern, Sophie
    Richter, Andreas
    Sessitsch, Angela
    [J]. ISME JOURNAL, 2011, 5 (03) : 389 - 402
  • [53] Methyl-mercury affects microbial activity and biomass, bacterial community structure but rarely the fungal community structure
    Rieder, Stephan R.
    Frey, Beat
    [J]. SOIL BIOLOGY & BIOCHEMISTRY, 2013, 64 : 164 - 173
  • [54] Methylation of Mercury in Earthworms and the Effect of Mercury on the Associated Bacterial Communities
    Rieder, Stephan Raphael
    Brunner, Ivano
    Daniel, Otto
    Liu, Bian
    Frey, Beat
    [J]. PLOS ONE, 2013, 8 (04):
  • [55] Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier
    Rime, Thomas
    Hartmann, Martin
    Frey, Beat
    [J]. ISME JOURNAL, 2016, 10 (07) : 1625 - 1641
  • [56] Heterogeneity of soil carbon pools and fluxes in a channelized and a restored floodplain section (Thur River, Switzerland)
    Samaritani, E.
    Shrestha, J.
    Fournier, B.
    Frossard, E.
    Gillet, F.
    Guenat, C.
    Niklaus, P. A.
    Pasquale, N.
    Tockner, K.
    Mitchell, E. A. D.
    Luster, J.
    [J]. HYDROLOGY AND EARTH SYSTEM SCIENCES, 2011, 15 (06) : 1757 - 1769
  • [57] Moisture effects on microbial activity and community structure in decomposing birch litter in the Alaskan taiga
    Schimel, JP
    Gulledge, JM
    Clein-Curley, JS
    Lindstrom, JE
    Braddock, JF
    [J]. SOIL BIOLOGY & BIOCHEMISTRY, 1999, 31 (06) : 831 - 838
  • [58] Towards improved instrumentation for assessing river-groundwater interactions in a restored river corridor
    Schneider, P.
    Vogt, T.
    Schirmer, M.
    Doetsch, J.
    Linde, N.
    Pasquale, N.
    Perona, P.
    Cirpka, O. A.
    [J]. HYDROLOGY AND EARTH SYSTEM SCIENCES, 2011, 15 (08) : 2531 - 2549
  • [59] SCHNURER J, 1982, APPL ENVIRON MICROB, V43, P1256
  • [60] Flooding forested groundwater recharge areas modifies microbial communities from top soil to groundwater table
    Schuetz, Kirsten
    Nagel, Peter
    Vetter, Walter
    Kandeler, Ellen
    Ruess, Liliane
    [J]. FEMS MICROBIOLOGY ECOLOGY, 2009, 67 (01) : 171 - 182