The relationship between eDNA particle concentration and organism abundance in nature is strengthened by allometric scaling

被引:79
作者
Yates, M. C. [1 ]
Glaser, D. M. [2 ]
Post, J. R. [2 ]
Cristescu, M. E. [3 ]
Fraser, D. J. [4 ]
Derry, A. M. [1 ]
机构
[1] Univ Quebec Montreal, 141 Ave President Kennedy, Montreal, PQ H2X 1Y4, Canada
[2] Univ Calgary, Calgary, AB, Canada
[3] McGill Univ, Montreal, PQ, Canada
[4] Concordia Univ, Montreal, PQ, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
abundance; allometric scaling; allometry; biomass; density; eDNA; environmental DNA; TROUT SALVELINUS-FONTINALIS; ENVIRONMENTAL DNA DETECTION; ECOLOGICAL STOICHIOMETRY; FISH POPULATIONS; METABOLIC THEORY; SIZE; DEGRADATION; TEMPERATURE; LAKES; QUANTIFICATION;
D O I
10.1111/mec.15543
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Organism abundance is a critical parameter in ecology, but its estimation is often challenging. Approaches utilizing eDNA to indirectly estimate abundance have recently generated substantial interest. However, preliminary correlations observed between eDNA concentration and abundance in nature are typically moderate in strength with significant unexplained variation. Here, we apply a novel approach to integrate allometric scaling coefficients into models of eDNA concentration and organism abundance. We hypothesize that eDNA particle production scales nonlinearly with mass, with scaling coefficients < 1. Wild populations often exhibit substantial variation in individual body size distributions; we therefore predict that the distribution of mass across individuals within a population will influence population-level eDNA production rates. To test our hypothesis, we collected standardized body size distribution and mark-recapture abundance data using whole-lake experiments involving nine populations of brook trout. We correlated eDNA concentration with three metrics of abundance: density (individuals/ha), biomass (kg/ha) and allometrically scaled mass (ASM) ( n-ary sumation (individual mass(0.73))/ha). Density and biomass were both significantly positively correlated with eDNA concentration (adj.r(2) = 0.59 and 0.63, respectively), but ASM exhibited improved model fit (adj.r(2) = 0.78). We also demonstrate how estimates of ASM derived from eDNA samples in "unknown" systems can be converted to biomass or density estimates with additional size-structure data. Future experiments should empirically validate allometric scaling coefficients for eDNA production, particularly where substantial intraspecific size distribution variation exists. Incorporating allometric scaling may improve predictive models to the extent that eDNA concentration may become a reliable indicator of abundance in nature.
引用
收藏
页码:3068 / 3082
页数:15
相关论文
共 84 条
  • [1] NEW LOOK AT STATISTICAL-MODEL IDENTIFICATION
    AKAIKE, H
    [J]. IEEE TRANSACTIONS ON AUTOMATIC CONTROL, 1974, AC19 (06) : 716 - 723
  • [2] Towards an integration of ecological stoichiometry and the metabolic theory of ecology to better understand nutrient cycling
    Allen, Andrew P.
    Gillooly, James F.
    [J]. ECOLOGY LETTERS, 2009, 12 (05) : 369 - 384
  • [3] Metabolic theory and taxonomic identity predict nutrient recycling in a diverse food web
    Allgeier, Jacob Edward
    Wenger, Seth J.
    Rosemond, Amy D.
    Schindler, Daniel E.
    Layman, Craig A.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 112 (20) : E2640 - E2647
  • [4] [Anonymous], 2019, R: A Language and Environment for Statistical Computing
  • [5] [Anonymous], 1938, The American Mathematical Monthly, DOI [10.2307/2304025, DOI 10.2307/2304025]
  • [6] Efficacy of Environmental DNA to Detect and Quantify Brook Trout Populations in Headwater Streams of the Adirondack Mountains, New York
    Baldigo, Barry P.
    Sporn, Lee Ann
    George, Scott D.
    Ball, Jacob A.
    [J]. TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY, 2017, 146 (01) : 99 - 111
  • [7] The ecology of environmental DNA and implications for conservation genetics
    Barnes, Matthew A.
    Turner, Cameron R.
    [J]. CONSERVATION GENETICS, 2016, 17 (01) : 1 - 17
  • [8] Environmental Conditions Influence eDNA Persistence in Aquatic Systems
    Barnes, Matthew A.
    Turner, Cameron R.
    Jerde, Christopher L.
    Renshaw, Mark A.
    Chadderton, W. Lindsay
    Lodge, David M.
    [J]. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2014, 48 (03) : 1819 - 1827
  • [9] BONAR SA, 2009, AM FISH SOC ANNU M S
  • [10] Brown JH, 2004, ECOLOGY, V85, P1771, DOI 10.1890/03-9000