The complete chloroplast genome sequence ofSenna toraand phylogenetic analysis

被引:2
|
作者
Xu, Qing [1 ]
Ma, Lirong [1 ]
Chen, Guo [2 ]
机构
[1] Northwest Univ, Coll Life Sci, Xian, Peoples R China
[2] Fourth Mil Med Univ, Sch Pharm, Dept Biopharmaceut, Xian, Shaanxi, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词
S; tora; chloroplast genome; phylogenetic analysis; genetic information;
D O I
10.1080/23802359.2020.1781573
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete chloroplast genome sequence ofSenna torawas characterized from Illumina pair-end sequencing. The chloroplast genome ofS. torawas 161,050 bp in length, containing a large single-copy region (LSC) of 90,411 bp, a small single-copy region (SSC) of 18,537 bp, and two inverted repeat (IR) regions of 26,050 bp. The overall GC content is 36.20%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.4%, and 60.2%, respectively. The genome contains 129 complete genes, including 8 rRNAs, 37 tRNAs and 84 protein coding genes. The Neighbour-joining phylogenetic analysis showed thatS. toraandS. bicapsularisclustered together as sisters to otherSennaspecies.
引用
收藏
页码:3433 / 3435
页数:3
相关论文
共 50 条
  • [1] The complete chloroplast genome sequence ofChlorella vulgarisand phylogenetic analysis
    Wen, Yangmin
    Wan, Duanjing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2713 - 2715
  • [2] Complete chloroplast genome ofSenna spectabilis(DC.) HS Irwin & Barneby (Fabaceae) and phylogenetic analysis
    Shi, Zhaowan
    Shi, Guozheng
    Zhao, Kunkun
    Sun, Bing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2855 - 2856
  • [3] The complete chloroplast genome sequence of Veratrum oxysepalum and phylogenetic analysis
    Chen, Zi-Jian
    Liu, Jia-Jia
    Zhang, Ying-Min
    Qian, Zi-Gang
    Li, Guo-Dong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2015 - 2016
  • [4] The complete chloroplast genome sequence of Gentiana atropurpurea and phylogenetic analysis
    Liu, Chen
    Hou, Zhen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 629 - 630
  • [5] Complete chloroplast genome sequence and phylogenetic analysis of Camellia fraterna
    Yu, Bo
    Sun, Ying-bo
    Liu, Xiao-fei
    Huang, Li-li
    Xu, Ye-chun
    Zhao, Chao-yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (04): : 3840 - 3842
  • [6] Complete chloroplast genome sequence and phylogenetic analysis ofSyzygium malaccense
    Tao, Liang
    Shi, Zhuo-Gong
    Long, Qing-Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3567 - 3568
  • [7] Complete chloroplast genome sequence and phylogenetic analysis of Torenia fournieri
    Chen, Gang
    Wang, Li-guo
    Wang, Ying-hua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2004 - 2006
  • [8] Complete chloroplast genome sequence and phylogenetic analysis of Populus deltoides Caihong
    Zhuang, Weibing
    Shu, Xiaochun
    Zhang, Hui
    Wang, Tao
    Zhang, Fengjiao
    Wang, Ning
    Wang, Zhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 389 - 390
  • [9] Complete chloroplast genome sequence of Rosa roxburghii and its phylogenetic analysis
    Wang, Qian
    Hu, Huan
    An, Jiaxing
    Bai, Guohui
    Ren, Qunli
    Liu, Jianguo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 149 - 150
  • [10] Complete chloroplast genome sequence and phylogenetic analysis of Celosia cristata 'Xiaguang'
    Liu, Xiao-fei
    Ye, Yuan-jun
    Liu, Jin-mei
    Yu, Bo
    Xu, Ye-chun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1338 - 1339