Recent evolutionary acquisition of alternative pre-mRNA splicing and 3' processing regulations induced by intronic B2 SINE insertion

被引:17
|
作者
Michel, D
Chatelain, G
Mauduit, C
Benahmed, M
Brun, G
机构
[1] ECOLE NORMALE SUPER LYON,UMR 49 CNRS,BIOL CELLULAIRE & MOL LAB,F-69364 LYON,FRANCE
[2] CTR HOSP LYON SUD,INSERM U407,F-69495 PIERRE BENITE,FRANCE
关键词
D O I
10.1093/nar/25.16.3228
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Contrary to the membrane-anchored leukemia inhibitory factor receptor (LIFR), the mouse soluble LIFR is an inhibitor of LIF action, possibly through a ligand titration effect, Two mRNA species encoding the soluble LIFR have been identified. Since the S'-untranslated end of the shorter form was shown to contain a B2 element, vie have examined the possibility that this SINE may be responsible for LIFR mRNA truncation. Transient expression assays, using BP-derived or intron-derived sequences independently or in conjunction, show that the B2 element has fortuitously unmasked a cryptic pre-mRNA 3' processing activity of silent intron sequences. The corresponding locus of the rat genome has been isolated and was shown to be devoid of any retroposon, which may explain why no soluble LIER has yet been identified in any other species and further indicates that the B2 insertion event in the mouse LIFR gene has occurred recently during evolution. And yet, a tight tissue-specific regulation of alternative synthesis of soluble and membrane-bound LIFR mRNA has already emerged in mice. These results provide striking evidence for the rapid influence of retroposition on genome expression.
引用
收藏
页码:3228 / 3234
页数:7
相关论文
共 31 条
  • [11] Palmitate- and C6 ceramide-induced Tnnt3 pre-mRNA alternative splicing occurs in a PP2A dependent manner
    Black, Adam J.
    Schilder, Rudolf J.
    Kimball, Scot R.
    NUTRITION & METABOLISM, 2018, 15
  • [12] Relationship between 3' end formation and SL2-specific trans-splicing in polycistronic Caenorhabditis elegans pre-mRNA processing
    Kuersten, S
    Lea, K
    MacMorris, M
    Spieth, J
    Blumenthal, T
    RNA, 1997, 3 (03) : 269 - 278
  • [13] Structure of the human sarco/endoplasmic reticulum Ca2+-ATPase 3 gene -: Promoter analysis and alternative splicing of the SERCA3 pre-mRNA
    Dode, L
    De Greef, C
    Mountian, I
    Attard, M
    Town, MM
    Casteels, R
    Wuytack, F
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (22) : 13982 - 13994
  • [14] A UHM-ULM interface contributes to the pre-mRNA splicing functions of U2AF2 and SF3B1
    Galardi, Justin W.
    Bela, Victoria N.
    Jeffery, Nazish N.
    Glasser, Eliezra
    Loerch, Sarah
    Jenkins, Jermaine L.
    Pulvino, Mary J.
    Kielkopf, Clara L.
    BIOPHYSICAL JOURNAL, 2022, 121 (03) : 451A - 451A
  • [15] Angulin proteins ILDR1 and ILDR2 regulate alternative pre-mRNA splicing through binding to splicing factors TRA2A, TRA2B, or SRSF1
    Liu, Yueyue
    Nie, Hongyun
    Liu, Chengcheng
    Zhai, Xiaoyan
    Sang, Qing
    Wang, Yanfei
    Shi, Deli
    Wang, Lei
    Xu, Zhigang
    SCIENTIFIC REPORTS, 2017, 7
  • [16] Angulin proteins ILDR1 and ILDR2 regulate alternative pre-mRNA splicing through binding to splicing factors TRA2A, TRA2B, or SRSF1
    Yueyue Liu
    Hongyun Nie
    Chengcheng Liu
    Xiaoyan Zhai
    Qing Sang
    Yanfei Wang
    Deli Shi
    Lei Wang
    Zhigang Xu
    Scientific Reports, 7
  • [17] LINC01348 suppresses hepatocellular carcinoma metastasis through inhibition of SF3B3-mediated EZH2 pre-mRNA splicing
    Yang-Hsiang Lin
    Meng-Han Wu
    Yi-Chung Liu
    Ping-Chiang Lyu
    Chau-Ting Yeh
    Kwang-Huei Lin
    Oncogene, 2021, 40 : 4675 - 4685
  • [18] LINC01348 suppresses hepatocellular carcinoma metastasis through inhibition of SF3B3-mediated EZH2 pre-mRNA splicing
    Lin, Yang-Hsiang
    Wu, Meng-Han
    Liu, Yi-Chung
    Lyu, Ping-Chiang
    Yeh, Chau-Ting
    Lin, Kwang-Huei
    ONCOGENE, 2021, 40 (28) : 4675 - 4685
  • [19] LINC01348 SUPPRESSES HEPATOCELLULAR CARCINOMA METASTASIS THROUGH INHIBITION OF SF3B3-MEDIATED EZH2 PRE-mRNA SPLICING
    Lin, Yang Hsiang
    Yeh, Chau Ting
    Lin, Kwang-Huei
    HEPATOLOGY, 2021, 74 : 304A - 304A
  • [20] Muscle-Specific Splicing Factors ASD-2 and SUP-12 Cooperatively Switch Alternative Pre-mRNA Processing Patterns of the ADF/Cofilin Gene in Caenorhabditis elegans
    Ohno, Genta
    Ono, Kanako
    Togo, Marina
    Watanabe, Yohei
    Ono, Shoichiro
    Hagiwara, Masatoshi
    Kuroyanagi, Hidehito
    PLOS GENETICS, 2012, 8 (10):