Molecular cloning and expression profile analysis of Ginkgo biloba DXS gene encoding 1-deoxy-D-xylulose 5-phosphate synthase, the first committed enzyme of the 2-C-methyl-D-erythritol 4-phosphate pathway

Plant diterpenes such as ginkgolides are biosynthesized via the recently discovered 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway. The initial step of the MEP pathway is the formation of 1-deoxy-D-xylulose 5-phosphate (DXP) catalyzed by 1-deoxy-D-xylulose 5-phosphate synthase (DXS, EC: 4.1.3.37), which may thus be considered the first committed step of the MEP pathway for ginkgolides biosynthesis. The full-length cDNA of DXS was isolated and characterized from the gymnosperm plant species, Ginkgo biloba. The full-length cDNA of GbDXS was 2795 bp containing a 2154 bp open reading frame (ORF) encoding 717 amino acids. Comparative and bioinformatic analyses revealed that GbDXS has extensive homology with DXSs from other plant species and, like these, contains a conserved transit peptide for plastid import, histidine residue, a putative thiamine diphosphate-binding site and a transketolase motif. Phylogenetic analysis indicates that GbDXS belongs to the plant DXS1 cluster and suggests it to be more ancient than other plant DXSs. GbDXS was found to be expressed in all tested tissues including roots, stems, leaves, pericarps and seeds. Expression profiling analyses revealed that GbDXS expression was induced by exogenous elicitors including methyl jasmonate, arachidonic acid, acetylsalicylic acid and ceric ammonium sulfate, and showed that the transcription levels were correlated with ginkgolide accumulation, suggesting that DXS might play a regulatory role in ginkgolide biosynthesis in cell culture of G. biloba at the transcriptional level.