共 29 条
W-net: A Convolutional Neural Network for Retinal Vessel Segmentation
被引:4
作者:

Reyes-Figueroa, Alan
论文数: 0 引用数: 0
h-index: 0
机构:
Ctr Invest Matemat AC, Guanajuato 36023, GTO, Mexico Ctr Invest Matemat AC, Guanajuato 36023, GTO, Mexico

Rivera, Mariano
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h-index: 0
机构:
Ctr Invest Matemat AC, Guanajuato 36023, GTO, Mexico Ctr Invest Matemat AC, Guanajuato 36023, GTO, Mexico
机构:
[1] Ctr Invest Matemat AC, Guanajuato 36023, GTO, Mexico
来源:
PATTERN RECOGNITION (MCPR 2021)
|
2021年
/
12725卷
关键词:
Vessel segmentation;
Neural networks;
Medical imaging;
BLOOD-VESSELS;
IMAGES;
D O I:
10.1007/978-3-030-77004-4_34
中图分类号:
TP18 [人工智能理论];
学科分类号:
081104 ;
0812 ;
0835 ;
1405 ;
摘要:
In this paper we propose a method for retinal vessel segmentation based on a multi-stage deep convolutional neural network with short connections. The proposed method is a two-stage application of an improved U-net architecture. In the first stage, a probability score for the vascular structure presence is computed from a set of random patches taken from the image dataset. In the second stage, this probability is refined to obtain a final threshold image of the vessel structure. The main contributions of this paper are the following: (1) We propose a modification for the distribution of weights in the U-net, called here the V-net model, which is more convenient for reconstruction tasks. (2) We propose a multi-stage version of our model, called here the W-net, and we conduct extensive experimental evidence in which the W-net produces high-quality results for retinal vessel segmentation. (3) We also propose a fast operating version of the W-net, and evaluate potential improvements when modify our proposal. We evaluate the performance of our methods in various public available datasets, and compare our proposal versus other recently developed methods. The experimental results demonstrate the capabilities and potential of our proposal.
引用
收藏
页码:355 / 368
页数:14
相关论文
共 29 条
[1]
Molecular pathogenesis of retinal and choroidal vascular diseases
[J].
Campochiaro, Peter A.
.
PROGRESS IN RETINAL AND EYE RESEARCH,
2015, 49
:67-81

Campochiaro, Peter A.
论文数: 0 引用数: 0
h-index: 0
机构:
Johns Hopkins Univ, Sch Med, Dept Ophthalmol, Baltimore, MD 21287 USA
Johns Hopkins Univ, Sch Med, Dept Neurosci, Baltimore, MD 21287 USA Johns Hopkins Univ, Sch Med, Dept Ophthalmol, Baltimore, MD 21287 USA
[2]
Cerebral Angiography for Multimodal Surgical Planning in Epilepsy Surgery: Description of a New Three-Dimensional Technique and Literature Review
[J].
Cardinale, Francesco
;
Pero, Guglielmo
;
Quilici, Luca
;
Piano, Mariangela
;
Colombo, Paola
;
Moscato, Alessio
;
Castana, Laura
;
Casaceli, Giuseppe
;
Fuschillo, Dalila
;
Gennari, Luciana
;
Cenzato, Marco
;
Lo Russo, Giorgio
;
Cossu, Massimo
.
WORLD NEUROSURGERY,
2015, 84 (02)
:358-367

Cardinale, Francesco
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Pero, Guglielmo
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Neuroradiol, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Quilici, Luca
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Neuroradiol, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Piano, Mariangela
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Neuroradiol, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Colombo, Paola
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Med Phys, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Moscato, Alessio
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Med Phys, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Castana, Laura
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Casaceli, Giuseppe
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Fuschillo, Dalila
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Gennari, Luciana
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Neuroradiol, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Cenzato, Marco
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Dept Neurosurg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Lo Russo, Giorgio
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy

Cossu, Massimo
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy
[3]
Angiogenesis in cancer and other diseases
[J].
Carmeliet, P
;
Jain, RK
.
NATURE,
2000, 407 (6801)
:249-257

Carmeliet, P
论文数: 0 引用数: 0
h-index: 0
机构:
Katholieke Univ Leuven VIB, Ctr Transgene Technol & Gene Therapy, B-3000 Louvain, Belgium Katholieke Univ Leuven VIB, Ctr Transgene Technol & Gene Therapy, B-3000 Louvain, Belgium

Jain, RK
论文数: 0 引用数: 0
h-index: 0
机构: Katholieke Univ Leuven VIB, Ctr Transgene Technol & Gene Therapy, B-3000 Louvain, Belgium
[4]
Multi-trajectories automatic planner for StereoElectroEncephaloGraphy (SEEG)
[J].
De Momi, E.
;
Caborni, C.
;
Cardinale, F.
;
Casaceli, G.
;
Castana, L.
;
Cossu, M.
;
Mai, R.
;
Gozzo, F.
;
Francione, S.
;
Tassi, L.
;
Lo Russo, G.
;
Antiga, L.
;
Ferrigno, G.
.
INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY,
2014, 9 (06)
:1087-1097

De Momi, E.
论文数: 0 引用数: 0
h-index: 0
机构:
Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Caborni, C.
论文数: 0 引用数: 0
h-index: 0
机构:
Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Cardinale, F.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Casaceli, G.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Castana, L.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Cossu, M.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Mai, R.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Gozzo, F.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Francione, S.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Tassi, L.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Lo Russo, G.
论文数: 0 引用数: 0
h-index: 0
机构:
Osped Niguarda Ca Granda, Claudio Munari Ctr Epilepsy & Parkinson Surg, Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Antiga, L.
论文数: 0 引用数: 0
h-index: 0
机构:
Orobix Srl, Bergamo, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy

Ferrigno, G.
论文数: 0 引用数: 0
h-index: 0
机构:
Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy Politecn Milan, Dept Elect Informat & Bioengn DEIB, I-20133 Milan, Italy
[5]
Statistical study of parameters for deep brain stimulation automatic preoperative planning of electrodes trajectories
[J].
Essert, Caroline
;
Fernandez-Vidal, Sara
;
Capobianco, Antonio
;
Haegelen, Claire
;
Karachi, Carine
;
Bardinet, Eric
;
Marchal, Maud
;
Jannin, Pierre
.
INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY,
2015, 10 (12)
:1973-1983

Essert, Caroline
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

Fernandez-Vidal, Sara
论文数: 0 引用数: 0
h-index: 0
机构:
UPMC, Hop La Pitie Salpetriere, INSERM U975, ICM CENIR,CNRS UMR 7225, F-75013 Paris, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

Capobianco, Antonio
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

Haegelen, Claire
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Rennes 1, LTSI, INSERM UMR 1099, F-35043 Rennes, France
Rennes Univ Hosp, Dept Neurosurg, F-35000 Rennes, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

Karachi, Carine
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 06, Sorbonne Univ, Hop La Pitie Salpetriere, Dept Neurosurg,INSERM,CNRS,INRIA,ICM AP HP, F-75013 Paris, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

Bardinet, Eric
论文数: 0 引用数: 0
h-index: 0
机构:
UPMC, Hop La Pitie Salpetriere, INSERM U975, ICM CENIR,CNRS UMR 7225, F-75013 Paris, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

Marchal, Maud
论文数: 0 引用数: 0
h-index: 0
机构:
INSA Rennes, INRIA Rennes Bretagne Atlantique, IRISA, F-35042 Rennes, France Univ Strasbourg, CNRS, ICube, UMR 7357, F-67412 Illkirch Graffenstaden, France

论文数: 引用数:
h-index:
机构:
[6]
Validation of a stereo camera system to quantify brain deformation due to breathing and pulsatility
[J].
Faria, Carlos
;
Sadowsky, Ofri
;
Bicho, Estela
;
Ferrigno, Giancarlo
;
Joskowicz, Leo
;
Shoham, Moshe
;
Vivanti, Refael
;
De Momi, Elena
.
MEDICAL PHYSICS,
2014, 41 (11)

Faria, Carlos
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal
Univ Minho, Ctr Algoritmi, P-4800058 Guimaraes, Portugal Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

Sadowsky, Ofri
论文数: 0 引用数: 0
h-index: 0
机构:
Technion Israel Inst Technol, Dept Mech Engn, Med Robot Lab, IL-32000 Haifa, Israel Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

Bicho, Estela
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal
Univ Minho, Ctr Algoritmi, P-4800058 Guimaraes, Portugal Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

Ferrigno, Giancarlo
论文数: 0 引用数: 0
h-index: 0
机构:
Politecn Milan, NearLab, Dept Elect Informat & Bioengn, I-20133 Milan, Italy Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

Joskowicz, Leo
论文数: 0 引用数: 0
h-index: 0
机构:
Hebrew Univ Jerusalem, Sch Engn & Comp Sci, IL-91904 Jerusalem, Israel Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

Shoham, Moshe
论文数: 0 引用数: 0
h-index: 0
机构:
Technion Israel Inst Technol, Dept Mech Engn, Med Robot Lab, IL-32000 Haifa, Israel Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

Vivanti, Refael
论文数: 0 引用数: 0
h-index: 0
机构:
Hebrew Univ Jerusalem, Sch Engn & Comp Sci, IL-91904 Jerusalem, Israel Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal

De Momi, Elena
论文数: 0 引用数: 0
h-index: 0
机构:
Politecn Milan, NearLab, Dept Elect Informat & Bioengn, I-20133 Milan, Italy Univ Minho, Dept Ind Elect, MARLab, P-4800058 Guimaraes, Portugal
[7]
Two-step phase shifting algorithms: Where are we?
[J].
Flores, Victor H.
;
Reyes-Figueroa, Alan
;
Carrillo-Delgado, Cesar
;
Rivera, Mariano
.
OPTICS AND LASER TECHNOLOGY,
2020, 126

Flores, Victor H.
论文数: 0 引用数: 0
h-index: 0
机构:
Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico
Univ Politecn Bicentenario, Dept Ingn Robot, Silao 36283, Gto, Mexico Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico

Reyes-Figueroa, Alan
论文数: 0 引用数: 0
h-index: 0
机构:
Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico

Carrillo-Delgado, Cesar
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Politecn Bicentenario, Dept Ingn Robot, Silao 36283, Gto, Mexico Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico

Rivera, Mariano
论文数: 0 引用数: 0
h-index: 0
机构:
Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico Ctr Invest Matemat AC, Guanajuato 36023, Gto, Mexico
[8]
Blood vessel segmentation methodologies in retinal images - A survey
[J].
Fraz, M. M.
;
Remagnino, P.
;
Hoppe, A.
;
Uyyanonvara, B.
;
Rudnicka, A. R.
;
Owen, C. G.
;
Barman, S. A.
.
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE,
2012, 108 (01)
:407-433

Fraz, M. M.
论文数: 0 引用数: 0
h-index: 0
机构:
Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England

Remagnino, P.
论文数: 0 引用数: 0
h-index: 0
机构:
Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England

Hoppe, A.
论文数: 0 引用数: 0
h-index: 0
机构:
Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England

Uyyanonvara, B.
论文数: 0 引用数: 0
h-index: 0
机构:
Thammasat Univ, Sirindhorn Int Inst Technol, Dept Informat Technol, Bangkok, Thailand Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England

Rudnicka, A. R.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ London, Div Populat Hlth Sci & Educ, London, England Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England

Owen, C. G.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ London, Div Populat Hlth Sci & Educ, London, England Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England

Barman, S. A.
论文数: 0 引用数: 0
h-index: 0
机构:
Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England Kingston Univ, Digital Imaging Res Ctr, Fac Sci Engn & Comp, London, England
[9]
Locating the optic nerve in a retinal image using the fuzzy convergence of the blood vessels
[J].
Hoover, A
;
Goldbaum, M
.
IEEE TRANSACTIONS ON MEDICAL IMAGING,
2003, 22 (08)
:951-958

Hoover, A
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Ophthalmol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Ophthalmol, La Jolla, CA 92093 USA

Goldbaum, M
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Ophthalmol, La Jolla, CA 92093 USA Univ Calif San Diego, Dept Ophthalmol, La Jolla, CA 92093 USA
[10]
Locating blood vessels in retinal images by piecewise threshold probing of a matched filter response
[J].
Hoover, A
;
Kouznetsova, V
;
Goldbaum, M
.
IEEE TRANSACTIONS ON MEDICAL IMAGING,
2000, 19 (03)
:203-210

Hoover, A
论文数: 0 引用数: 0
h-index: 0
机构:
Clemson Univ, Dept Elect & Comp Engn, Clemson, SC 29634 USA Clemson Univ, Dept Elect & Comp Engn, Clemson, SC 29634 USA

Kouznetsova, V
论文数: 0 引用数: 0
h-index: 0
机构: Clemson Univ, Dept Elect & Comp Engn, Clemson, SC 29634 USA

Goldbaum, M
论文数: 0 引用数: 0
h-index: 0
机构: Clemson Univ, Dept Elect & Comp Engn, Clemson, SC 29634 USA