Optical tweezers in single-molecule biophysics

被引:455
作者
Bustamante, Carlos J. [1 ,2 ,3 ,4 ,5 ]
Chemla, Yann R. [6 ]
Liu, Shixin [7 ]
Wang, Michelle D. [8 ]
机构
[1] Univ Calif Berkeley, Dept Mol & Cell Biol, 229 Stanley Hall, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Dept Phys, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
[4] Univ Calif Berkeley, Kavli Energy NanoSci Inst, Berkeley, CA 94720 USA
[5] Univ Calif Berkeley, Howard Hughes Med Inst, Berkeley, CA 94720 USA
[6] Univ Illinois, Ctr Phys Living Cells, Dept Phys, Urbana, IL 61801 USA
[7] Rockefeller Univ, Lab Nanoscale Biophys & Biochem, 1230 York Ave, New York, NY 10021 USA
[8] Cornell Univ, Howard Hughes Med Inst, Dept Phys, Lab Atom & Solid State Phys, Ithaca, NY 14850 USA
来源
NATURE REVIEWS METHODS PRIMERS | 2021年 / 1卷 / 01期
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
FREE-ENERGY DIFFERENCES; HIGH-RESOLUTION; RNA-POLYMERASE; DNA-MOLECULES; STRANDED-DNA; NONEQUILIBRIUM MEASUREMENTS; FORCE SPECTROSCOPY; MAGNETIC TWEEZERS; INTERSUBUNIT COORDINATION; INDIVIDUAL NUCLEOSOMES;
D O I
10.1038/s43586-021-00021-6
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Optical tweezers have become the method of choice in single-molecule manipulation studies. In this Primer, we first review the physical principles of optical tweezers and the characteristics that make them a powerful tool to investigate single molecules. We then introduce the modifications of the method to extend the measurement of forces and displacements to torques and angles, and to develop optical tweezers with single-molecule fluorescence detection capabilities. We discuss force and torque calibration of these instruments, their various modes of operation and most common experimental geometries. We describe the type of data obtained in each experimental design and their analyses. This description is followed by a survey of applications of these methods to the studies of protein-nucleic acid interactions, protein/RNA folding and molecular motors. We also discuss data reproducibility, the factors that lead to the data variability among different laboratories and the need to develop field standards. We cover the current limitations of the methods and possible ways to optimize instrument operation, data extraction and analysis, before suggesting likely areas of future growth.
引用
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页数:29
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