Namhaeicola litoreus gen. nov., sp nov., a member of the family Flavobacteriaceae isolated from seawater

被引:10
作者
Jung, Yong-Taek [2 ,3 ]
Kim, Ji-Hoon [2 ]
Kang, So-Jung [2 ]
Oh, Tae-Kwang [2 ]
Yoon, Jung-Hoon [1 ]
机构
[1] Sungkyunkwan Univ, Dept Food Sci & Biotechnol, Suwon 440746, South Korea
[2] KRIBB, Taejon 306809, South Korea
[3] UST, Taejon 305350, South Korea
关键词
TIDAL FLAT SEDIMENT; BACTERIA; IDENTIFICATION; TAXA;
D O I
10.1099/ijs.0.036046-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative, non-flagellated, non-gliding and pleomorphic bacterial strain, designated DPG-25(T), was isolated from seawater in a seaweed farm in the South Sea in Korea and its taxonomic position was investigated by using a polyphasic approach. Strain DPG-25(T) grew optimally at 25 degrees C, at pH 7.0-7.5 and in the presence of 2% (w/v) NaCl. Flexirubin-type pigments were not produced. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain DPG-25(T) formed a cluster with the type strains of Actibacter sediminis, Aestuariicola saemankumensis and Lutimonas vermicola. Strain DPG-25(T) exhibited 16S rRNA gene sequence similarity values of 95.3, 93.1 and 93.6% to the type strains of Actibacter sediminis, Aestuariicola saemankumensis and L. vermicola, respectively. Strain DPG-25(T) contained MK-6 as the predominant menaquinone and iso-C-15:0 and iso-C-17:0 3-OH as the major fatty acids. The major polar lipids detected in strain DPG-25(T) were phosphatidylethanolamine and one unidentified lipid. The DNA G+C content was 39.9 mol%. Differential phenotypic properties and the phylogenetic distinctiveness of strain DPG-25(T) demonstrated that this strain is distinguishable from Actibacter sediminis, Aestuariicola saemankumensis and L. vermicola. On the basis of the data presented here, strain DPG-25(T) represents a novel species in a novel genus of the family Flavobacteriaceae, for which the name Namhaeicola litoreus gen. nov., sp. nov. is proposed. The type strain of Namhaeicola litoreus is DPG-25(T) (=KCTC 23702(T) =CCUG 61485(T)).
引用
收藏
页码:2163 / 2168
页数:6
相关论文
共 23 条
[1]  
[Anonymous], 1990, Technical Note 101
[2]  
Baumann P., 1981, The prokaryotes, P1302
[3]  
Bernardet J.-F., 2011, BERGEYS MANUAL SYSTE, V4, P106
[4]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[5]   Description of Cellulophaga algicola sp nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. [J].
Bowman, JP .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1861-1868
[6]   Muricauda ruestringensis gen. nov., sp nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment [J].
Bruns, A ;
Rohde, M ;
Berthe-Corti, L .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1997-2006
[7]   KINETIC STUDIES OF PIGMENT SYNTHESIS BY NON-SULFUR PURPLE BACTERIA [J].
COHENBAZIRE, G ;
SISTROM, WR ;
STANIER, RY .
JOURNAL OF CELLULAR AND COMPARATIVE PHYSIOLOGY, 1957, 49 (01) :25-68
[8]   Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridization [J].
Cottrell, MT ;
Kirchman, DL .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (12) :5116-5122
[9]  
Cowan ST, 1965, MANUAL IDENTIFICATIO
[10]   Actibacter sediminis gen. nov., sp nov., a marine bacterium of the family Flavobacteriaceae isolated from tidal flat sediment [J].
Kim, Ju-Hyoung ;
Kim, Ki-Youn ;
Hahm, Young-Tae ;
Kim, Bong-Soo ;
Chun, Jongsik ;
Cha, Chang-Jun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :139-143