Benchmarking HEp-2 Cells Classification Methods

被引:175
|
作者
Foggia, Pasquale [1 ]
Percannella, Gennaro [1 ]
Soda, Paolo [2 ]
Vento, Mario [1 ]
机构
[1] Univ Salerno, Dept Informat Engn Elect Engn & Appl Math, I-84084 Fisciano, Italy
[2] Univ Campus Biomed Rome, Integrated Res Ctr, Comp Sci & Bioinformat Lab, I-00128 Rome, Italy
关键词
Computer-aided diagnosis (CAD); HEp-2 cells classification; indirect immunofluorescence; IMMUNOFLUORESCENCE PATTERNS; AUTOANTIBODIES; GUIDELINES; HISTOGRAMS; IMAGES; ROBUST; TESTS; ANA;
D O I
10.1109/TMI.2013.2268163
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
In this paper, we report on the first edition of the HEp-2 Cells Classification contest, held at the 2012 edition of the International Conference on Pattern Recognition, and focused on indirect immunofluorescence (IIF) image analysis. The IIF methodology is used to detect autoimmune diseases by searching for antibodies in the patient serum but, unfortunately, it is still a subjective method that depends too heavily on the experience and expertise of the physician. This has been the motivation behind the recent initial developments of computer aided diagnosis systems in this field. The contest aimed to bring together researchers interested in the performance evaluation of algorithms for IIF image analysis: 28 different recognition systems able to automatically recognize the staining pattern of cells within IIF images were tested on the same undisclosed dataset. In particular, the dataset takes into account the six staining patterns that occur most frequently in the daily diagnostic practice: centromere, nucleolar, homogeneous, fine speckled, coarse speckled, and cytoplasmic. In the paper, we briefly describe all the submitted methods, analyze the obtained results, and discuss the design choices conditioning the performance of each method.
引用
收藏
页码:1878 / 1889
页数:12
相关论文
共 50 条
  • [1] Novel opportunities in automated classification of antinuclear antibodies on HEp-2 cells
    Rigon, Amelia
    Buzzulini, Francesca
    Soda, Paolo
    Onofri, Leonardo
    Arcarese, Luisa
    Iannello, Giulio
    Afeltra, Antonella
    AUTOIMMUNITY REVIEWS, 2011, 10 (10) : 647 - 652
  • [2] Efficient k-NN based HEp-2 cells classifier
    Stoklasa, Roman
    Majtner, Tomas
    Svoboda, David
    PATTERN RECOGNITION, 2014, 47 (07) : 2409 - 2418
  • [3] On using active contour to segment HEp-2 cells
    Merone, Mario
    Soda, Paolo
    2016 IEEE 29TH INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS (CBMS), 2016, : 118 - 123
  • [4] Rheumatologist perspective of the Brazilian consensus for detection of auto antibodies in HEp-2 CELLS
    Medeiros Francescantonio, Isadora Carvalho
    Rodrigues dos Santos, Leandro Augusto
    Carvalho Francescantonio, Paulo Luiz
    Coelho Andrade, Luiz Eduardo
    Cruvinel, Wilson de Melo
    ADVANCES IN RHEUMATOLOGY, 2021, 61 (01)
  • [5] A classification-based approach to segment HEp-2 cells
    Percannella, G.
    Soda, P.
    Vento, M.
    2012 25TH INTERNATIONAL SYMPOSIUM ON COMPUTER-BASED MEDICAL SYSTEMS (CBMS), 2012,
  • [6] Mitotic cells recognition in HEp-2 images
    Iannello, Giulio
    Percannella, Gennaro
    Soda, Paolo
    Vento, Mario
    PATTERN RECOGNITION LETTERS, 2014, 45 : 136 - 144
  • [7] HEp-2 Cells Classification via Fusion of Morphological and Textural Features
    Theodorakopoulos, Ilias
    Kastaniotis, Dimitris
    Economou, George
    Fotopoulos, Spiros
    IEEE 12TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS & BIOENGINEERING, 2012, : 689 - 694
  • [8] A multi-process system for HEp-2 cells classification based on SVM
    Cascio, Donato
    Taormina, Vincenzo
    Cipolla, Marco
    Bruno, Salvatore
    Fauci, Francesco
    Raso, Giuseppe
    PATTERN RECOGNITION LETTERS, 2016, 82 : 56 - 63
  • [9] Ensembles of dense and dense sampling descriptors for the HEp-2 cells classification problem
    Nanni, Loris
    Lumini, Alessandra
    dos Santos, Florentino Luciano Caetano
    Paci, Michelangelo
    Hyttinen, Jari
    PATTERN RECOGNITION LETTERS, 2016, 82 : 28 - 35
  • [10] Mitotic HEp-2 Cells Recognition under Class Skew
    Percannella, Gennaro
    Soda, Paolo
    Vento, Mario
    IMAGE ANALYSIS AND PROCESSING - ICIAP 2011, PT II, 2011, 6979 (II): : 353 - +