Utilizing population variation, vaccination, and systems biology to study human immunology

被引:64
|
作者
Tsang, John S. [1 ,2 ]
机构
[1] NIAID, Syst Genom & Bioinformat Unit, Lab Syst Biol, Bethesda, MD 20892 USA
[2] NIH, TransNIH Ctr Human Immunol Autoimmun & Inflammat, Bethesda, MD 20892 USA
关键词
HUMAN IMMUNE-SYSTEM; SET ENRICHMENT ANALYSIS; YELLOW-FEVER VACCINE; T-CELL RESPONSES; GENE-EXPRESSION; INFLUENZA VACCINATION; GENOME-WIDE; MISSING HERITABILITY; SEASONAL INFLUENZA; ANTIBODY-RESPONSES;
D O I
10.1016/j.it.2015.06.005
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
The move toward precision medicine has highlighted the importance of understanding biological variability within and across individuals in the human population. In particular, given the prevalent involvement of the immune system in diverse pathologies, an important question is how much and what information about the state of the immune system is required to enable accurate prediction of future health and response to medical interventions. Towards addressing this question, recent studies using vaccination as a model perturbation and systems-biology approaches are beginning to provide a glimpse of how natural population variation together with multiplexed, high-throughput measurement and computational analysis can be used to uncover predictors of immune response quality in humans. Here I discuss recent developments in this emerging field, with emphasis on baseline correlates of vaccination responses, sources of immune-state variability, as well as relevant features of study design, data generation, and computational analysis.
引用
收藏
页码:479 / 493
页数:15
相关论文
共 50 条
  • [21] A genome wide association study between copy number variation (CNV) and human height in Chinese population
    Li, Xi
    Tan, Lijun
    Liu, Xiaogang
    Lei, Shufeng
    Yang, Tielin
    Chen, Xiangding
    Zhang, Fang
    Fang, Yue
    Guo, Yan
    Zhang, Liang
    Yan, Han
    Pan, Feng
    Zhang, Zhixin
    Peng, Yumei
    Zhou, Qi
    He, Lina
    Zhu, Xuezhen
    Cheng, Jing
    Zhang, Lishu
    Liu, Yaozhong
    Tian, Qing
    Deng, Hongwen
    JOURNAL OF GENETICS AND GENOMICS, 2010, 37 (12) : 779 - 785
  • [22] Persistent racial and ethnic disparities in flu vaccination coverage: Results from a population-based study
    Almario, Christopher V.
    May, Folasade P.
    Maxwell, Allison E.
    Ren, Wanmeng
    Ponce, Ninez A.
    Spiegel, Brennan M. R.
    AMERICAN JOURNAL OF INFECTION CONTROL, 2016, 44 (09) : 1004 - 1009
  • [23] Systems Biology in Alternatives: The Importance of Human-based Studies
    Bennett, Andrew
    ATLA-ALTERNATIVES TO LABORATORY ANIMALS, 2009, 37 : 89 - 91
  • [24] Systems biology strategy to study lipotoxicity and the metabolic syndrome
    Oresic, Matej
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, 2010, 1801 (03): : 235 - 239
  • [25] Application of systems biology to the study of chronic kidney disease
    Cao Yu-han
    Lu Lin-li
    Zhang Jian-dong
    Liu Bi-cheng
    CHINESE MEDICAL JOURNAL, 2012, 125 (14) : 2603 - 2609
  • [26] Networks, biology and systems engineering: A case study in inflammation
    Foteinou, P. T.
    Yang, E.
    Androulakis, I. P.
    COMPUTERS & CHEMICAL ENGINEERING, 2009, 33 (12) : 2028 - 2041
  • [27] "Gestaltomics": Systems Biology Schemes for the Study of Neuropsychiatric Diseases
    Gutierrez Najera, Nora A.
    Resendis-Antonio, Osbaldo
    Nicolini, Humberto
    FRONTIERS IN PHYSIOLOGY, 2017, 8
  • [28] Health Literacy, Socioeconomic Status and Vaccination Uptake: A Study on Influenza Vaccination in a Population-Based Sample
    Zanobini, Patrizio
    Lorini, Chiara
    Caini, Saverio
    Lastrucci, Vieri
    Masocco, Maria
    Minardi, Valentina
    Possenti, Valentina
    Mereu, Giovanna
    Cecconi, Rossella
    Bonaccorsi, Guglielmo
    INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 2022, 19 (11)
  • [29] Utilizing systems biology to reveal cellular responses to peroxisome proliferator-activated receptor γ ligand exposure
    Cheng, Vanessa
    Reddam, Aalekhya
    Bhatia, Anil
    Hur, Manhoi
    Kirkwood, Jay S.
    Volz, David C.
    CURRENT RESEARCH IN TOXICOLOGY, 2021, 2 : 169 - 178
  • [30] Utilizing the KSC Fixation Tube to Conduct Human-Tended Plant Biology Experiments on a Suborbital Spaceflight
    Haveman, Natasha J. J.
    Zhou, Mingqi
    Callaham, Jordan
    Strickland, Hunter F. F.
    Houze, Donald
    Manning-Roach, Susan
    Newsham, Gerard
    Paul, Anna-Lisa
    Ferl, Robert J. J.
    LIFE-BASEL, 2022, 12 (11):