Unraveling Adaptation in Eukaryotic Pathways: Lessons from Protocells

被引:18
作者
De Palo, Giovanna [1 ,2 ]
Endres, Robert G. [1 ,2 ]
机构
[1] Univ London Imperial Coll Sci Technol & Med, Dept Life Sci, London, England
[2] Univ London Imperial Coll Sci Technol & Med, Ctr Integrat Syst Biol & Bioinformat, London, England
关键词
BACTERIAL CHEMOTAXIS; ESCHERICHIA-COLI; DICTYOSTELIUM-DISCOIDEUM; SENSORY ADAPTATION; RECEPTOR-CELLS; G-PROTEINS; TRANSDUCTION; SIGNAL; PHOTOTRANSDUCTION; SPECIFICITY;
D O I
10.1371/journal.pcbi.1003300
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Eukaryotic adaptation pathways operate within wide-ranging environmental conditions without stimulus saturation. Despite numerous differences in the adaptation mechanisms employed by bacteria and eukaryotes, all require energy consumption. Here, we present two minimal models showing that expenditure of energy by the cell is not essential for adaptation. Both models share important features with large eukaryotic cells: they employ small diffusible molecules and involve receptor subunits resembling highly conserved G-protein cascades. Analyzing the drawbacks of these models helps us understand the benefits of energy consumption, in terms of adjustability of response and adaptation times as well as separation of cell-external sensing and cell-internal signaling. Our work thus sheds new light on the evolution of adaptation mechanisms in complex systems.
引用
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页数:10
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[1]   Robustness in bacterial chemotaxis [J].
Alon, U ;
Surette, MG ;
Barkai, N ;
Leibler, S .
NATURE, 1999, 397 (6715) :168-171
[2]   Robustness in simple biochemical networks [J].
Barkai, N ;
Leibler, S .
NATURE, 1997, 387 (6636) :913-917
[3]   TRANSIENT-RESPONSE TO CHEMOTACTIC STIMULI IN ESCHERICHIA-COLI [J].
BERG, HC ;
TEDESCO, PM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1975, 72 (08) :3235-3239
[4]   Bacterial chemoreceptor arrays are hexagonally packed trimers of receptor dimers networked by rings of kinase and coupling proteins [J].
Briegel, Ariane ;
Li, Xiaoxiao ;
Bilwes, Alexandrine M. ;
Hughes, Kelly T. ;
Jensen, Grant J. ;
Crane, Brian R. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (10) :3766-3771
[5]  
Brzostowski JA, 2013, J CELL SCI IN PRESS
[6]   Moving in the right direction: How eukaryotic cells migrate along chemical gradients [J].
Cai, Huaqing ;
Devreotes, Peter N. .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2011, 22 (08) :834-841
[7]   Chemotactic Response and Adaptation Dynamics in Escherichia coli [J].
Clausznitzer, Diana ;
Oleksiuk, Olga ;
Lovdok, Linda ;
Sourjik, Victor ;
Endres, Robert G. .
PLOS COMPUTATIONAL BIOLOGY, 2010, 6 (05) :1-11
[8]   Common dynamical features of sensory adaptation in photoreceptors and olfactory sensory neurons [J].
De Palo, Giovanna ;
Facchetti, Giuseppe ;
Mazzolini, Monica ;
Menini, Anna ;
Torre, Vincent ;
Altafini, Claudio .
SCIENTIFIC REPORTS, 2013, 3
[9]   The Language of Calcium Signaling [J].
Dodd, Antony N. ;
Kudla, Joerg ;
Sanders, Dale .
ANNUAL REVIEW OF PLANT BIOLOGY, VOL 61, 2010, 61 :593-620
[10]  
Dutta BK., 2010, Principles of mass transfer and separation processes