Mitochondrial genome of Taiwania circumdata (Coleoptera: Chrysomelidae: Cassidinae) and phylogenetic analysis

被引:1
作者
Yang, Xing-Zhuo [1 ]
Li, Xiao-Peng [1 ]
Wen, Chun-Li [1 ]
Jia, Cheng-Lin [1 ]
Zhang, Li [1 ]
Yuan, Ming-Long [1 ]
机构
[1] Lanzhou Univ, Coll Pastoral Agr Sci & Technol, State Key Lab Grassland Agroecosyst, Lanzhou, Gansu, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2017年 / 2卷 / 02期
关键词
Leaf beetles; Cassidinae; mitochondrial DNA; evolution; phylogeny;
D O I
10.1080/23802359.2017.1383205
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this study we sequenced and annotated the nearly complete mitochondrial genome (mitogenome) of Taiwania circumdata (Coleoptera: Chrysomelidae: Cassidinae), an important insect pest on sweetpotato and water spinach in Southern China. This mitogenome was 13,546 bp long and encoded 13 protein- coding genes (PCGs), 19 transfer RNA genes (tRNAs) and 2 ribosomal RNA unit genes. The T. circumdata mitogenome with an A + T content of 77.9% presented a positive AT-skew (0.126) and a negative GC-skew (-0.160). Eleven PCGs started with a typical ATN codon, whereas the remaining two PCGs used TTG (nad1) and AAT (cox1) as the initial codon. All the 19 tRNAs had a typical secondary cloverleaf structure, except for trnS1 (AGN) which lacked the dihydrouridine arm. Phylogenetic analyses using Bayesian inference and maximum likelihood methods based on the concatenated nucleotide sequences of 13 PCGs recovered a phylogeny of Bruchinae+((Galerucinae+Chrysomelinae) + (Criocerinae+Cassidinae)). In Cassidinae, T. circumdata and Laccoptera ruginosa formed a clade, which was sister to three Cassida species.
引用
收藏
页码:674 / 675
页数:2
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