Transcriptomic Changes in Young Japanese Males After Exposure to Acute Hypobaric Hypoxia

被引:9
|
作者
Yasukochi, Yoshiki [1 ]
Shin, Sora [2 ]
Wakabayashi, Hitoshi [3 ]
Maeda, Takafumi [4 ,5 ]
机构
[1] Mie Univ, Dept Human Funct Genom, Adv Sci Res Promot Ctr, Org Promot Reg Innovat, Tsu, Mie, Japan
[2] Kyushu Univ, Grad Sch Design, Fukuoka, Japan
[3] Hokkaido Univ, Fac Engn, Sapporo, Hokkaido, Japan
[4] Kyushu Univ, Fac Design, Dept Human Sci, Fukuoka, Japan
[5] Kyushu Univ, Fac Design, Physiol Anthropol Res Ctr, Fukuoka, Japan
关键词
acclimatization; differentially expressed gene; hypobaric hypoxia; RNA-seq; saliva; transcriptome; DIFFERENTIAL EXPRESSION ANALYSIS; QINGHAI-TIBETAN PLATEAU; HIGH-ALTITUDE; GENE-EXPRESSION; CYTOSCAPE PLUGIN; ADAPTATION; BIOCONDUCTOR; INTEGRATION; RESPONSES; ONTOLOGY;
D O I
10.3389/fgene.2020.559074
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
After the genomic era, the development of high-throughput sequencing technologies has allowed us to advance our understanding of genetic variants responsible for adaptation to high altitude in humans. However, transcriptomic characteristics associated with phenotypic plasticity conferring tolerance to acute hypobaric hypoxic stress remain unclear. To elucidate the effects of hypobaric hypoxic stress on transcriptional variability, we aimed to describe transcriptomic profiles in response to acute hypobaric hypoxia in humans. In a hypobaric hypoxic chamber, young Japanese males were exposed to a barometric pressure of 493 mmHg (hypobaric hypoxia) for 75 min after resting for 30 min at the pressure of 760 mmHg (normobaric normoxia) at 28 degrees C. Saliva samples of the subjects were collected before and after hypobaric hypoxia exposure, to be used for RNA sequencing. Differential gene expression analysis identified 30 significantly upregulated genes and some of these genes may be involved in biological processes influencing hematological or immunological responses to hypobaric hypoxic stress. We also confirmed the absence of any significant transcriptional fluctuations in the analysis of basal transcriptomic profiles under no-stimulus conditions, suggesting that the 30 genes were actually upregulated by hypobaric hypoxia exposure. In conclusion, our findings showed that the transcriptional profiles of Japanese individuals can be rapidly changed as a result of acute hypobaric hypoxia, and this change may influence the phenotypic plasticity of lowland individuals for acclimatization to a hypobaric hypoxic environment. Therefore, the results obtained in this study shed light on the transcriptional mechanisms underlying high-altitude acclimatization in humans.
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页数:10
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