Assessing the Intricate Balance of Intermolecular Interactions upon Self-Association of Intrinsically Disordered Proteins

被引:11
作者
Rieloff, Ellen [1 ]
Tully, Mark D. [2 ]
Skepo, Marie [1 ]
机构
[1] Lund Univ, Theoret Chem, POB 124, SE-22100 Lund, Sweden
[2] ESRF, Grenoble, France
关键词
intrinsically disordered proteins; SAXS; self-association; Monte Carlo simulations; coarse-graining; MOLECULAR-DYNAMICS SIMULATIONS; HUMAN SALIVARY STATHERIN; MONTE-CARLO METHOD; PHASE-SEPARATION; FORCE-FIELD; WATER; UREA; TEMPERATURE; AGGREGATION; ADSORPTION;
D O I
10.1016/j.jmb.2018.11.027
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Attractive interactions between intrinsically disordered proteins can be crucial for the functionality or, on the contrary, lead to the formation of harmful aggregates. For obtaining a molecular understanding of intrinsically disordered proteins and their interactions, computer simulations have proven to be a valuable complement to experiments. In this study, we present a coarse-grained model and its applications to a system dominated by attractive interactions, namely, the self-association of the saliva protein Statherin. SAXS experiments show that Statherin self-associates with increased protein concentration, and that both an increased temperature and a lower ionic strength decrease the size of the formed complexes. The model captures the observed trends and provides insight into the size distribution. Hydrophobic interaction is considered to be the major driving force of the self-association, while electrostatic repulsion represses the growth. In addition, the model suggests that the decrease of association number with increased temperature is of entropic origin. (C) 2018 The Authors. Published by Elsevier Ltd.
引用
收藏
页码:511 / 523
页数:13
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