Development and Evaluation of Novel Real-Time Reverse Transcription-PCR Assays with Locked Nucleic Acid Probes Targeting Leader Sequences of Human-Pathogenic Coronaviruses

被引:55
作者
Chan, Jasper Fuk-Woo [1 ,2 ,3 ,4 ]
Choi, Garnet Kwan-Yue [2 ]
Tsang, Alan Ka-Lun [2 ]
Tee, Kah-Meng [2 ]
Lam, Ho-Yin [5 ]
Yip, Cyril Chik-Yan [2 ]
To, Kelvin Kai-Wang [1 ,2 ,3 ,4 ]
Cheng, Vincent Chi-Chung [2 ]
Yeung, Man-Lung [2 ]
Lau, Susanna Kar-Pui [1 ,2 ,3 ,4 ]
Woo, Patrick Chiu-Yat [1 ,2 ,3 ,4 ]
Chan, Kwok-Hung [2 ]
Tang, Bone Siu-Fai [5 ]
Yuen, Kwok-Yung [1 ,2 ,3 ,4 ]
机构
[1] Univ Hong Kong, State Key Lab Emerging Infect Dis, Hong Kong, Hong Kong, Peoples R China
[2] Univ Hong Kong, Dept Microbiol, Hong Kong, Hong Kong, Peoples R China
[3] Univ Hong Kong, Res Ctr Infect & Immunol, Hong Kong, Hong Kong, Peoples R China
[4] Univ Hong Kong, Carol Yu Ctr Infect, Hong Kong, Hong Kong, Peoples R China
[5] Hong Kong Sanat & Hosp, Dept Pathol, Hong Kong, Hong Kong, Peoples R China
关键词
RESPIRATORY SYNDROME CORONAVIRUS; CELL-LINE; HCOV-EMC; VIRUS; DISEASE; TESTS; LNA; AMPLIFICATION; PERFORMANCE; VALIDATION;
D O I
10.1128/JCM.01224-15
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Based on findings in small RNA-sequencing (Seq) data analysis, we developed highly sensitive and specific real-time reverse transcription (RT)-PCR assays with locked nucleic acid probes targeting the abundantly expressed leader sequences of Middle East respiratory syndrome coronavirus (MERS-CoV) and other human coronaviruses. Analytical and clinical evaluations showed their noninferiority to a commercial multiplex PCR test for the detection of these coronaviruses.
引用
收藏
页码:2722 / 2726
页数:5
相关论文
共 40 条
[1]   Evaluation of commercial ResPlex II v2.0, MultiCode®-PLx, and xTAG® respiratory viral panels for the diagnosis of respiratory viral infections in adults [J].
Balada-Llasat, Joan-Miquel ;
LaRue, Heidi ;
Kelly, Cheryl ;
Rigali, Lisa ;
Pancholi, Preeti .
JOURNAL OF CLINICAL VIROLOGY, 2011, 50 (01) :42-45
[2]   Middle East Respiratory Syndrome Coronavirus: Another Zoonotic Betacoronavirus Causing SARS-Like Disease [J].
Chan, Jasper F. W. ;
Lau, Susanna K. P. ;
To, Kelvin K. W. ;
Cheng, Vincent C. C. ;
Woo, Patrick C. Y. ;
Yuen, Kwok-Yung .
CLINICAL MICROBIOLOGY REVIEWS, 2015, 28 (02) :465-522
[3]   Broad-spectrum antivirals for the emerging Middle East respiratory syndrome coronavirus [J].
Chan, Jasper F. W. ;
Chan, Kwok-Hung ;
Kao, Richard Y. T. ;
To, Kelvin K. W. ;
Zheng, Bo-Jian ;
Li, Clara P. Y. ;
Li, Patrick T. W. ;
Dai, Jun ;
Mok, Florence K. Y. ;
Chen, Honglin ;
Hayden, Frederick G. ;
Yuen, Kwok-Yung .
JOURNAL OF INFECTION, 2013, 67 (06) :606-616
[4]   Is the discovery of the novel human betacoronavirus 2c EMC/2012 (HCoV-EMC) the beginning of another SARS-like pandemic? [J].
Chan, Jasper F. W. ;
Li, Kenneth S. M. ;
To, Kelvin K. W. ;
Cheng, Vincent C. C. ;
Chen, Honglin ;
Yuen, Kwok-Yung .
JOURNAL OF INFECTION, 2012, 65 (06) :477-489
[5]   Cross-species transmission and emergence of novel viruses from birds [J].
Chan, Jasper Fuk-Woo ;
To, Kelvin Kai-Wang ;
Chen, Honglin ;
Yuen, Kwok-Yung .
CURRENT OPINION IN VIROLOGY, 2015, 10 :63-69
[6]   Interspecies transmission and emergence of novel viruses: lessons from bats and birds [J].
Chan, Jasper Fuk-Woo ;
To, Kelvin Kai-Wang ;
Tse, Herman ;
Jin, Dong-Yan ;
Yuen, Kwok-Yung .
TRENDS IN MICROBIOLOGY, 2013, 21 (10) :544-555
[7]   The emerging novel Middle East respiratory syndrome coronavirus: The "knowns" and "unknowns" [J].
Chan, Jasper Fuk-Woo ;
Lau, Susanna Kar-Pui ;
Woo, Patrick Chiu-Yat .
JOURNAL OF THE FORMOSAN MEDICAL ASSOCIATION, 2013, 112 (07) :372-381
[8]   Differential Cell Line Susceptibility to the Emerging Novel Human Betacoronavirus 2c EMC/2012: Implications for Disease Pathogenesis and Clinical Manifestation [J].
Chan, Jasper Fuk-Woo ;
Chan, Kwok-Hung ;
Choi, Garnet Kwan-Yue ;
To, Kelvin Kai-Wang ;
Tse, Herman ;
Cai, Jian-Piao ;
Yeung, Man Lung ;
Cheng, Vincent Chi-Chung ;
Chen, Honglin ;
Che, Xiao-Yan ;
Lau, Susanna Kar-Pui ;
Woo, Patrick Chiu-Yat ;
Yuen, Kwok-Yung .
JOURNAL OF INFECTIOUS DISEASES, 2013, 207 (11) :1743-1752
[9]   Use of the human colorectal adenocarcinoma (Caco-2) cell line for isolating respiratory viruses from nasopharyngeal aspirates [J].
Chan, K. H. ;
Yan, M. K. ;
To, K. K. W. ;
Lau, S. K. ;
Woo, P. C. ;
Cheng, V. C. C. ;
Li, W. S. ;
Chan, J. F. W. ;
Tse, H. ;
Yuen, K. Y. .
JOURNAL OF MEDICAL VIROLOGY, 2013, 85 (05) :874-879
[10]   Analytical Sensitivity of Seven Point-of-Care Influenza Virus Detection Tests and Two Molecular Tests for Detection of Avian Origin H7N9 and Swine Origin H3N2 Variant Influenza A Viruses [J].
Chan, Kwok-Hung ;
To, Kelvin K. W. ;
Chan, Jasper F. W. ;
Li, Clara P. Y. ;
Chen, Honglin ;
Yuen, Kwok-Yung .
JOURNAL OF CLINICAL MICROBIOLOGY, 2013, 51 (09) :3160-3161