A genetically encoded 19F NMR probe for lysine acetylation

被引:50
|
作者
Zhang, Feng [1 ,2 ,3 ,4 ]
Zhou, Qing [2 ]
Yang, Guiwen [1 ]
An, Liguo [1 ]
Li, Fahui [2 ]
Wang, Jiangyun [2 ]
机构
[1] Shandong Normal Univ, Coll Life Sci, Shandong Prov Key Lab Anim Resistance Biol, 88 East Wenhua Rd, Jinan 250014, Shandong, Peoples R China
[2] Chinese Acad Sci, Inst Biophys, Lab RNA Biol, 15 Datun Rd, Beijing 100101, Peoples R China
[3] Taishan Med Univ, Key Lab Atherosclerosis Univ Shandong, Tai An 271000, Shandong, Peoples R China
[4] Taishan Med Univ, Inst Atherosclerosis, Tai An 271000, Shandong, Peoples R China
基金
美国国家科学基金会;
关键词
UNNATURAL AMINO-ACIDS; HISTONE ACETYLATION; CHROMATIN-STRUCTURE; MAMMALIAN-CELLS; DNA-BINDING; POSTTRANSLATIONAL MODIFICATION; PHOTOCLICK-CHEMISTRY; PROTEIN INTERACTIONS; CROSS-LINK; P53;
D O I
10.1039/c7cc09825a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Advances in acetylated protein-protein/DNA interactions depend on the development of a novel NMR (nuclear magnetic resonance) probe to study the conformational changes of acetylated proteins. However, the method for detecting the acetylated protein conformation is underdeveloped. Herein, an acetyllysine mimic has been exploited for detecting the conformational changes of acetylated p53-protein/DNA interactions by genetic code expansion and F-19 NMR. This F-19 NMR probe shows high structural similarity to acetyllysine and could not be deacetylated by sirtuin deacetylase in vitro/vivo. Moreover, acetylation of p53 K164 is reported to be deacetylated by SIRT2 for the first time.
引用
收藏
页码:3879 / 3882
页数:4
相关论文
共 50 条
  • [31] 19F NMR applications in chemical biology
    Cobb, Steven L.
    Murphy, Cormac D.
    JOURNAL OF FLUORINE CHEMISTRY, 2009, 130 (02) : 132 - 143
  • [32] A 19F NMR study of enzyme activity
    Peterman, KE
    Lentz, K
    Duncan, J
    JOURNAL OF CHEMICAL EDUCATION, 1998, 75 (10) : 1283 - 1284
  • [33] Protein 19F NMR in Escherichia coli
    Li, Conggang
    Wang, Gui-Fang
    Wang, Yaqiang
    Creager-Allen, Rachel
    Lutz, Evan A.
    Scronce, Heidi
    Slade, Kristin M.
    Ruf, Rebecca A. S.
    Mehl, Ryan A.
    Pielak, Gary J.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2010, 132 (01) : 321 - 327
  • [34] Substituent effects on scalar 2J(19F,19F) and 3J(19F,19F) NMR couplings:: A comparison of SOPPA and DFT methods
    Barone, V
    Provasi, PF
    Peralta, JE
    Snyder, JP
    Sauer, SPA
    Contreras, RH
    JOURNAL OF PHYSICAL CHEMISTRY A, 2003, 107 (23): : 4748 - 4754
  • [35] 19F NMR OF NITROSO RUBBER COPOLYMER
    LAWSON, DD
    INGHAM, JD
    JOURNAL OF POLYMER SCIENCE PART B-POLYMER LETTERS, 1968, 6 (3PB): : 181 - &
  • [36] Advances in the study of GPCRs by 19F NMR
    Picard, Louis-Philippe
    Prosser, Robert Scott
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2021, 69 : 169 - 176
  • [37] 19F NMR SPECTRUM OF IF7
    GILLESPIE, RJ
    QUAIL, JW
    CANADIAN JOURNAL OF CHEMISTRY-REVUE CANADIENNE DE CHIMIE, 1964, 42 (12): : 2671 - &
  • [38] Quantitative analysis of the slow exchange process by 19F NMR in the presence of scalar and dipolar couplings: applications to the ribose 2′-19F probe in nucleic acids
    Toyama, Yuki
    Shimada, Ichio
    JOURNAL OF BIOMOLECULAR NMR, 2024, 78 (04) : 215 - 235
  • [39] Measurement of surface parameters via 19F NMR of adsorbed organofluorine probe molecules.
    Tavener, SJ
    Budarin, VL
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2005, 229 : U704 - U704
  • [40] Spectroscopic study of cyclen-based 19F NMR probe for detection of hydrogen sulfide
    Shigehiko Takegami
    Yuki Aramoto
    Atsuko Konishi
    Analytical Sciences, 2022, 38 : 813 - 820