Allostery in Orai1 binding to calmodulin revealed from conformational thermodynamics

被引:5
|
作者
Maganti, Lakshmi [1 ,4 ]
Dutta, Sutapa [1 ]
Ghosh, Mahua [1 ]
Chakrabarti, J. [1 ,2 ,3 ]
机构
[1] SN Bose Natl Ctr Basic Sci, Dept Chem Biol & Macromol Sci, Sect 3,Block JD, Kolkata 700106, India
[2] SN Bose Natl Ctr Basic Sci, Unit Nanosci & Technol 2, Sect 3,Block JD, Kolkata 700106, India
[3] SN Bose Natl Ctr Basic Sci, Themat Unit Excellence Computat Mat Sci, Sect 3,Block JD, Kolkata 700106, India
[4] Saha Inst Nucl Phys, Computat Sci Div, 1 AF, Kolkata 700064, India
关键词
calmodulin-Orai1; complex; molecular dynamics; conformational thermodynamics; allostery; CALCIUM-BINDING; EF-HAND; ACTIVATION; CONSEQUENCES; MUTATIONS; DYNAMICS; DOMAIN; SITES;
D O I
10.1080/07391102.2018.1430617
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Here, we study microscopic mechanism of complex formation between Ca2+-bound calmodulin (holoCaM) and Orai1 that regulates Ca2+-dependent inactivation process in eukaryotic cells. We compute conformational thermodynamic changes in holoCaM with respect to complex of Orai1 bound to C-terminal domain of holoCaM using histograms of dihedral angles of the proteins over trajectories from molecular dynamics simulations. Our analysis shows that the N-terminal domain residues L4, T5, Q41, N42, T44 and E67 of holoCaM get destabilized and disordered due to Orai1 binding to C-terminal domain of calmodulin affect the N-terminal domain residues. Among these residues, polar T44, having maximum destabilization and disorder via backbone fluctuations, shows the largest change in solvent exposure. This suggests that N-terminal domain is allosterically regulated via T44 by the binding of Orai1 to the C-terminal domain.
引用
收藏
页码:493 / 502
页数:10
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