Unimolecular Fragmentation of Deprotonated Diproline [Pro2-H]- Studied by Chemical Dynamics Simulations and IRMPD Spectroscopy

被引:16
|
作者
Martin-Somer, Ana [1 ,2 ]
Martens, Jonathan [3 ]
Grzetic, Josipa [3 ]
Hase, William L. [4 ]
Oomens, Jos [3 ,5 ]
Spezia, Riccardo [1 ,6 ]
机构
[1] Univ Paris Saclay, CEA CNRS, Lab Anal & Modelisat Biol & Environm, F-91025 Evry, France
[2] Univ Autonoma Madrid, Fac Ciencias, Dept Quim, Modulo 13,Campus Excelencia UAM CSIC, E-28049 Madrid, Spain
[3] Radboud Univ Nijmegen, Inst Mol & Mat, FELIX Lab, Toernooiveld 7c, NL-6525 ED Nijmegen, Netherlands
[4] Texas Tech Univ, Dept Chem & Biochem, Lubbock, TX 79409 USA
[5] Univ Amsterdam, Vant Hoff Inst Mol Sci, Sci Pk 908, NL-1098 XH Amsterdam, Netherlands
[6] Sorbonne Univ, CNRS, LCT, F-75005 Paris, France
来源
JOURNAL OF PHYSICAL CHEMISTRY A | 2018年 / 122卷 / 10期
基金
美国国家科学基金会;
关键词
INDUCED DISSOCIATION MECHANISMS; SPECTROMETRY-BASED PROTEOMICS; CIS PEPTIDE-BONDS; MASS-SPECTROMETRY; GAS REACTIONS; IONS; IDENTIFICATION; TRIPEPTIDES; ACTIVATION; DIPEPTIDES;
D O I
10.1021/acs.jpca.7b11873
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Dissociation chemistry of the diproline anion [Pro(2)-H](-) is studied using chemical dynamics simulations coupled with quantum-chemical calculations and RRKM analysis. Pro(2)(-) is chosen due to its reduced size and the small number of sites where deprotonation can take place. The mechanisms leading to the two dominant collision-induced dissociation (CID) product ions are elucidated. Trajectories from a variety of isomers of [Pro(2)-H](-) were followed in order to sample a larger range of possible reactivity. While different mechanisms yielding y(1)(-) product ions are proposed, there is only one mechanism yielding the b(2)(-) ion. This mechanism leads to formation of a b(2)(-) fragment with a diketopiperazine structure. The sole formation of a diketopiperazine b(2) sequence ion is experimentally confirmed by infrared ion spectroscopy of the fragment anion. Furthermore, collisional and internal energy activation simulations are used in parallel to identify the different dynamical aspects of the observed reactivity.
引用
收藏
页码:2612 / 2625
页数:14
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