Minimizing thermodynamic length to select intermediate states for free-energy calculations and replica-exchange simulations (vol 80, 046705, 2009)

被引:1
作者
Shenfeld, Daniel K.
Xu, Huafeng
Eastwood, Michael P.
Dror, Ron O.
Shaw, David E.
机构
来源
PHYSICAL REVIEW E | 2009年 / 80卷 / 04期
关键词
free energy;
D O I
10.1103/PhysRevE.80.049904
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
In computational thermodynamics, a sequence of intermediate states is commonly introduced to connect two equilibrium states. We consider two cases where the choice of intermediate states is particularly important: minimizing statistical error in free-energy difference calculations and maximizing average acceptance probabilities in replica-exchange simulations. We derive bounds for these quantities in terms of the thermodynamic distance between the intermediates, and show that in both cases the intermediates should be chosen as equidistant points along a geodesic connecting the end states.
引用
收藏
页数:1
相关论文
共 1 条
[1]  
Shenfeld DK, 2009, PHYS REV E, V80, DOI 10.1103/PhysRevE.80.046705