Real-time cell analysis: A high-throughput approach for testing SARS-CoV-2 antibody neutralization and escape

被引:0
作者
Suryadevara, Naveenchandra [1 ]
Gilchuk, Pavlo [1 ]
Zost, Seth J. [1 ]
Mittal, Nikhil [3 ]
Zhao, Li Leyna [3 ]
Crowe Jr, James E. [1 ,2 ,4 ]
Carnahan, Robert H. [1 ,4 ]
机构
[1] Vanderbilt Univ, Med Ctr, Vanderbilt Vaccine Ctr, Nashville, TN 37232 USA
[2] Vanderbilt Univ, Med Ctr, Dept Pathol Microbiol & Immunol, Nashville, TN 37232 USA
[3] Agilent Technol, 6779 Mesa Ridge Rd,Suite 100, San Diego, CA 92121 USA
[4] Vanderbilt Univ, Med Ctr, Dept Pediat, Nashville, TN 37232 USA
来源
STAR PROTOCOLS | 2022年 / 3卷 / 02期
关键词
D O I
暂无
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Real-time cell analysis (RTCA) enables high-throughput, quantitative kinetic measurements of cytopathic effect (CPE) in virus-infected cells. Here, we detail a RTCA approach for assessing antibody neutralization. We describe how to evaluate the neutralizing potency of monoclonal antibodies (mAbs) and identify viral escape mutants to antibody neutralization for severe respiratory syndrome coronavirus 2 (SARS-CoV-2).For complete details on the use and execution of this protocol, please refer to Zost et al. (2020) and Suryadevara et al. (2021).
引用
收藏
页数:17
相关论文
共 11 条
[1]   SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor [J].
Hoffmann, Markus ;
Kleine-Weber, Hannah ;
Schroeder, Simon ;
Krueger, Nadine ;
Herrler, Tanja ;
Erichsen, Sandra ;
Schiergens, Tobias S. ;
Herrler, Georg ;
Wu, Nai-Huei ;
Nitsche, Andreas ;
Mueller, Marcel A. ;
Drosten, Christian ;
Poehlmann, Stefan .
CELL, 2020, 181 (02) :271-+
[2]   Development of a humanized monoclonal antibody (MEDI-493) with potent in vitro and in vivo activity against respiratory syncytial virus [J].
Johnson, S ;
Oliver, C ;
Prince, GA ;
Hemming, VG ;
Pfarr, DS ;
Wang, SC ;
Dormitzer, M ;
OGrady, J ;
Koenig, S ;
Tamura, JK ;
Woods, R ;
Bansal, G ;
Couchenour, D ;
Tsao, E ;
Hall, WC ;
Young, JF .
JOURNAL OF INFECTIOUS DISEASES, 1997, 176 (05) :1215-1224
[3]   Broadly neutralizing antibodies against influenza viruses [J].
Laursen, Nick S. ;
Wilson, Ian A. .
ANTIVIRAL RESEARCH, 2013, 98 (03) :476-483
[4]   Enhancing dengue virus maturation using a stable furin over-expressing cell line [J].
Mukherjee, Swati ;
Sirohi, Devika ;
Dowd, Kimberly A. ;
Chen, Zhenguo ;
Diamond, Michael S. ;
Kuhn, Richard J. ;
Pierson, Theodore C. .
VIROLOGY, 2016, 497 :33-40
[5]   Development of Clinical-Stage Human Monoclonal Antibodies That Treat Advanced Ebola Virus Disease in Nonhuman Primates [J].
Pascal, Kristen E. ;
Dudgeon, Drew ;
Trefry, John C. ;
Anantpadma, Manu ;
Sakurai, Yasuteru ;
Murin, Charles D. ;
Turner, Hannah L. ;
Fairhurst, Jeanette ;
Torres, Marcela ;
Rafique, Ashique ;
Yan, Ying ;
Badithe, Ashok ;
Yu, Kevin ;
Potocky, Terra ;
Bixler, Sandra L. ;
Chance, Taylor B. ;
Pratt, William D. ;
Rossi, Franco D. ;
Shamblin, Joshua D. ;
Wollen, Suzanne E. ;
Zelko, Justine M. ;
Carrion, Ricardo, Jr. ;
Worwa, Gabriella ;
Staples, Hilary M. ;
Burakov, Darya ;
Babb, Robert ;
Chen, Gang ;
Martin, Joel ;
Huang, Tammy T. ;
Erlandson, Karl ;
Willis, Melissa S. ;
Armstrong, Kimberly ;
Dreier, Thomas M. ;
Ward, Andrew B. ;
Davey, Robert A. ;
Pitt, Margaret L. M. ;
Lipsich, Leah ;
Mason, Peter ;
Olson, William ;
Stahl, Neil ;
Kyratsous, Christos A. .
JOURNAL OF INFECTIOUS DISEASES, 2018, 218 :S612-S626
[6]   A humanized form of a CD4-specific monoclonal antibody exhibits decreased antigenicity and prolonged plasma half-life in rhesus monkeys while retaining its unique biological and antiviral properties [J].
Reimann, KA ;
Lin, WY ;
Bixler, S ;
Browning, B ;
Ehrenfels, BN ;
Lucci, J ;
Miatkowski, K ;
Olson, D ;
Parish, TH ;
Rosa, MD ;
Oleson, FB ;
Hsu, YM ;
Padlan, EA ;
Letvin, NL ;
Burkly, LC .
AIDS RESEARCH AND HUMAN RETROVIRUSES, 1997, 13 (11) :933-943
[7]   Most neutralizing human monoclonal antibodies target novel epitopes requiring both Lassa virus glycoprotein subunits [J].
Robinson, James E. ;
Hastie, Kathryn M. ;
Cross, Robert W. ;
Yenni, Rachael E. ;
Elliott, Deborah H. ;
Rouelle, Julie A. ;
Kannadka, Chandrika B. ;
Smira, Ashley A. ;
Garry, Courtney E. ;
Bradley, Benjamin T. ;
Yu, Haini ;
Shaffer, Jeffrey G. ;
Boisen, Matt L. ;
Hartnett, Jessica N. ;
Zandonatti, Michelle A. ;
Rowland, Megan M. ;
Heinrich, Megan L. ;
Martinez-Sobrido, Luis ;
Cheng, Benson ;
de la Torre, Juan C. ;
Andersen, Kristian G. ;
Goba, Augustine ;
Momoh, Mambu ;
Fullah, Mohamed ;
Gbakie, Michael ;
Kanneh, Lansana ;
Koroma, Veronica J. ;
Fonnie, Richard ;
Jalloh, Simbirie C. ;
Kargbo, Brima ;
Vandi, Mohamed A. ;
Gbetuwa, Momoh ;
Ikponmwosa, Odia ;
Asogun, Danny A. ;
Okokhere, Peter O. ;
Follarin, Onikepe A. ;
Schieffelin, John S. ;
Pitts, Kelly R. ;
Geisbert, Joan B. ;
Kulakoski, Peter C. ;
Wilson, Russell B. ;
Happi, Christian T. ;
Sabeti, Pardis C. ;
Gevao, Sahr M. ;
Khan, S. Humarr ;
Grant, Donald S. ;
Geisbert, Thomas W. ;
Saphire, Erica Ollmann ;
Branco, Luis M. ;
Garry, Robert F. .
NATURE COMMUNICATIONS, 2016, 7
[8]   Neutralizing human antibodies prevent Zika virus replication and fetal disease in mice [J].
Sapparapu, Gopal ;
Fernandez, Estefania ;
Kose, Nurgun ;
Cao, Bin ;
Fox, Julie M. ;
Bombardi, Robin G. ;
Zhao, Haiyan ;
Nelson, Christopher A. ;
Bryan, Aubrey L. ;
Barnes, Trevor ;
Davidson, Edgar ;
Mysorekar, Indira U. ;
Fremont, Daved H. ;
Doranz, Benjamin J. ;
Diamond, Michael S. ;
Crowe, James E., Jr. .
NATURE, 2016, 540 (7633) :443-+
[9]   Persistence of Circulating Memory B Cell Clones with Potential for Dengue Virus Disease Enhancement for Decades following Infection [J].
Smith, Scott A. ;
Zhou, Yang ;
Olivarez, Nicholas P. ;
Broadwater, Anne H. ;
de Silva, Aravinda M. ;
Crowe, James E., Jr. .
JOURNAL OF VIROLOGY, 2012, 86 (05) :2665-2675
[10]   Neutralizing and protective human monoclonal antibodies recognizing the N-terminal domain of the SARS-CoV-2 spike protein [J].
Suryadevara, Naveenchandra ;
Shrihari, Swathi ;
Gilchuk, Pavlo ;
VanBlargan, Laura A. ;
Binshtein, Elad ;
Zost, Seth J. ;
Nargi, Rachel S. ;
Sutton, Rachel E. ;
Winkler, Emma S. ;
Chen, Elaine C. ;
Fouch, Mallorie E. ;
Davidson, Edgar ;
Doranz, Benjamin J. ;
Chen, Rita E. ;
Shi, Pei-Yong ;
Carnahan, Robert H. ;
Thackray, Larissa B. ;
Diamond, Michael S. ;
Crowe, James E., Jr. .
CELL, 2021, 184 (09) :2316-+