Soil Bacterial Community Structure Responses to Precipitation Reduction and Forest Management in Forest Ecosystems across Germany

被引:49
作者
Felsmann, Katja [1 ]
Baudis, Mathias [2 ]
Gimbel, Katharina [3 ]
Kayler, Zachary E. [1 ]
Ellerbrock, Ruth [1 ]
Bruehlheide, Helge [2 ]
Bruckhoff, Johannes [1 ]
Welk, Erik [2 ]
Puhlmann, Heike [3 ,4 ]
Weiler, Markus [3 ]
Gessler, Arthur [1 ,5 ,6 ]
Ulrich, Andreas [1 ]
机构
[1] Leibniz Ctr Agr Landscape Res ZALF, Inst Landscape Biogeochem, Muncheberg, Germany
[2] Univ Halle Wittenberg, Inst Biology Geobot & Bot Garden, D-06108 Halle, Germany
[3] Univ Freiburg, Fac Environm & Nat Resources, D-79106 Freiburg, Germany
[4] Forest Res Inst Baden Wurttemberg, Dept Soils & Environm, Freiburg, Germany
[5] Berlin Brandenburg Inst Adv Biodivers Res BBIB, Berlin, Germany
[6] Swiss Fed Inst Forest Snow & Landscape Res WSL, Birmensdorf, Switzerland
关键词
INDUCED TREE MORTALITY; MICROBIAL COMMUNITY; RIBOSOMAL-RNA; HERBACEOUS-LAYER; CLIMATE-CHANGE; DROUGHT; CARBON; DIVERSITY; GROWTH; WATER;
D O I
10.1371/journal.pone.0122539
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Soil microbial communities play an important role in forest ecosystem functioning, but how climate change will affect the community composition and consequently bacterial functions is poorly understood. We assessed the effects of reduced precipitation with the aim of simulating realistic future drought conditions for one growing season on the bacterial community and its relation to soil properties and forest management. We manipulated precipitation in beech and conifer forest plots managed at different levels of intensity in three different regions across Germany. The precipitation reduction decreased soil water content across the growing season by between 2 to 8% depending on plot and region. T-RFLP analysis and pyrosequencing of the 16S rRNA gene were used to study the total soil bacterial community and its active members after six months of precipitation reduction. The effect of reduced precipitation on the total bacterial community structure was negligible while significant effects could be observed for the active bacteria. However, the effect was secondary to the stronger influence of specific soil characteristics across the three regions and management selection of overstorey tree species and their respective understorey vegetation. The impact of reduced precipitation differed between the studied plots; however, we could not determine the particular parameters being able to modify the response of the active bacterial community among plots. We conclude that the moderate drought induced by the precipitation manipulation treatment started to affect the active but not the total bacterial community, which points to an adequate resistance of the soil microbial system over one growing season.
引用
收藏
页数:24
相关论文
共 87 条
[11]   Temperate forest trees and stands under severe drought:: a review of ecophysiological responses, adaptation processes and long-term consequences [J].
Breda, Nathalie ;
Huc, Roland ;
Granier, Andre ;
Dreyer, Erwin .
ANNALS OF FOREST SCIENCE, 2006, 63 (06) :625-644
[12]   Soil Microbial Community Responses to Multiple Experimental Climate Change Drivers [J].
Castro, Hector F. ;
Classen, Aimee T. ;
Austin, Emily E. ;
Norby, Richard J. ;
Schadt, Christopher W. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2010, 76 (04) :999-1007
[13]   Response of the Soil Microbial Community to Changes in Precipitation in a Semiarid Ecosystem [J].
Cregger, Melissa A. ;
Schadt, Christopher W. ;
McDowell, Nate G. ;
Pockman, William T. ;
Classen, Aimee T. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2012, 78 (24) :8587-8594
[14]   Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study [J].
Crowther, Thomas W. ;
Maynard, Daniel S. ;
Leff, Jonathan W. ;
Oldfield, Emily E. ;
McCulley, Rebecca L. ;
Fierer, Noah ;
Bradford, Mark A. .
GLOBAL CHANGE BIOLOGY, 2014, 20 (09) :2983-2994
[15]   Relationship Between Soil Properties and Patterns of Bacterial β-diversity Across Reclaimed and Natural Boreal Forest Soils [J].
Dimitriu, Pedro A. ;
Grayston, Susan J. .
MICROBIAL ECOLOGY, 2010, 59 (03) :563-573
[16]   Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities [J].
Dunbar, J ;
Ticknor, LO ;
Kuske, CR .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (01) :190-197
[17]   UCHIME improves sensitivity and speed of chimera detection [J].
Edgar, Robert C. ;
Haas, Brian J. ;
Clemente, Jose C. ;
Quince, Christopher ;
Knight, Rob .
BIOINFORMATICS, 2011, 27 (16) :2194-2200
[18]   Is bacterial moisture niche a good predictor of shifts in community composition under long-term drought? [J].
Evans, Sarah E. ;
Wallenstein, Matthew D. ;
Burke, Ingrid C. .
ECOLOGY, 2014, 95 (01) :110-122
[19]   The diversity and biogeography of soil bacterial communities [J].
Fierer, N ;
Jackson, RB .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (03) :626-631
[20]   Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays [J].
Fierer, N ;
Jackson, JA ;
Vilgalys, R ;
Jackson, RB .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (07) :4117-4120