Repeatability and timing of tropical influenza epidemics

被引:7
作者
Servadio, Joseph E. [1 ,2 ]
Thai, Pham Quang [3 ,4 ]
Choisy, Marc E. [5 ,6 ]
Boni, Maciej [1 ,2 ,6 ]
机构
[1] Penn State Univ, Ctr Infect Dis Dynam, University Pk, PA 16802 USA
[2] Penn State Univ, Dept Biol, University Pk, PA 16802 USA
[3] Natl Inst Hyg & Epidemiol, Hanoi, Vietnam
[4] Hanoi Med Univ, Sch Preventat Med & Publ Hlth, Hanoi, Vietnam
[5] Univ Oxford, Clin Res Unit, Ho Chi Minh City, Vietnam
[6] Univ Oxford, Ctr Trop Med & Global Hlth, Nuffield Dept Med, Oxford, England
基金
美国国家卫生研究院;
关键词
RESPIRATORY SYNCYTIAL VIRUS; SEASONAL INFLUENZA; UNITED-STATES; REPRODUCTION NUMBER; HUMIDITY; PATTERNS; SURVEILLANCE; TRANSMISSION; ILLNESS; VIETNAM;
D O I
10.1371/journal.pcbi.1011317
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Much of the world experiences influenza in yearly recurring seasons, particularly in temperate areas. These patterns can be considered repeatable if they occur predictably and consistently at the same time of year. In tropical areas, including southeast Asia, timing of influenza epidemics is less consistent, leading to a lack of consensus regarding whether influenza is repeatable. This study aimed to assess repeatability of influenza in Vietnam, with repeatability defined as seasonality that occurs at a consistent time of year with low variation. We developed a mathematical model incorporating parameters to represent periods of increased transmission and then fitted the model to data collected from sentinel hospitals throughout Vietnam as well as four temperate locations. We fitted the model for individual (sub)types of influenza as well as all combined influenza throughout northern, central, and southern Vietnam. Repeatability was evaluated through the variance of the timings of peak transmission. Model fits from Vietnam show high variance (sd = 64-179 days) in peak transmission timing, with peaks occurring at irregular intervals and throughout different times of year. Fits from temperate locations showed regular, annual epidemics in winter months, with low variance in peak timings (sd = 32-57 days). This suggests that influenza patterns are not repeatable or seasonal in Vietnam. Influenza prevention in Vietnam therefore cannot rely on anticipation of regularly occurring outbreaks. Author summaryMuch of the world experiences influenza in yearly recurring seasons, particularly in temperate locations. Such seasons occur each year with predictable timing. In tropical locations, even if there are influenza epidemics each year that are labeled influenza seasons, their timing is less consistent and predictable. Here, we define repeatability to refer to regular epidemics that are consistent and predictable in their timing, such as a yearly epidemic occurring during the same time of year. We measured the repeatability of influenza in Vietnam using data collected from ten years of sentinel surveillance. Using a mathematical model, we measured repeatability by estimating the timings of epidemics and how they spread throughout the year. We found that influenza epidemics in northern, central, and southern Vietnam varied widely in their timing; even if an epidemic occurred each year, their timings were typically inconsistent. By contrast, influenza epidemics were highly repeatable in four temperate locations examined. Through this, we show that influenza in Vietnam does not show consistent timings, making preparedness efforts such as vaccination campaigns difficult to design.
引用
收藏
页数:23
相关论文
共 87 条
[1]   Seasonality of influenza in Brazil: A traveling wave from the Amazon to the subtropics [J].
Alonso, Wladimir J. ;
Viboud, Cecile ;
Simonsen, Lone ;
Hirano, Eduardo W. ;
Daufenbach, Luciane Z. ;
Miller, Mark A. .
AMERICAN JOURNAL OF EPIDEMIOLOGY, 2007, 165 (12) :1434-1442
[2]   Influenza seasonality in Madagascar: the mysterious African free-runner [J].
Alonso, Wladimir Jimenez ;
Guillebaud, Julia ;
Viboud, Cecile ;
Razanajatovo, Norosoa Harline ;
Orelle, Arnaud ;
Zhou, Steven Zhixiang ;
Randrianasolo, Laurence ;
Heraud, Jean-Michel .
INFLUENZA AND OTHER RESPIRATORY VIRUSES, 2015, 9 (03) :101-109
[3]  
[Anonymous], 2019, ORAL HLTH SURVEILLAN
[4]  
[Anonymous], 2020, R LANG ENV STAT COMP
[5]   Real Time Bayesian Estimation of the Epidemic Potential of Emerging Infectious Diseases [J].
Bettencourt, Luis M. A. ;
Ribeiro, Ruy M. .
PLOS ONE, 2008, 3 (05)
[6]   Latitudinal Variations in Seasonal Activity of Influenza and Respiratory Syncytial Virus (RSV): A Global Comparative Review [J].
Bloom-Feshbach, Kimberly ;
Alonso, Wladimir J. ;
Charu, Vivek ;
Tamerius, James ;
Simonsen, Lone ;
Miller, Mark A. ;
Viboud, Cecile .
PLOS ONE, 2013, 8 (02)
[7]   Epidemic Influenza Seasons from 2008 to 2018 in Poland: A Focused Review of Virological Characteristics [J].
Byambasuren, Sainjargal ;
Paradowska-Stankiewicz, Iwona ;
Brydak, Lidia B. .
TRENDS IN BIOMEDICAL RESEARCH, 2020, 1251 :115-121
[8]  
Centers for Disease Control and Prevention, 2022, US INFL SURV PURP ME
[9]   Dynamics of Influenza Seasonality at Sub-Regional Levels in India and Implications for Vaccination Timing [J].
Chadha, Mandeep S. ;
Potdar, Varsha A. ;
Saha, Siddhartha ;
Koul, Parvaiz A. ;
Broor, Shobha ;
Dar, Lalit ;
Chawla-Sarkar, Mamta ;
Biswas, Dipankar ;
Gunasekaran, Palani ;
Abraham, Asha Mary ;
Shrikhande, Sunanda ;
Jain, Amita ;
Anukumar, Balakrishnan ;
Lal, Renu B. ;
Mishra, Akhilesh C. .
PLOS ONE, 2015, 10 (05)
[10]   Human mobility and the spatial transmission of influenza in the United States [J].
Charu, Vivek ;
Zeger, Scott ;
Gog, Julia ;
Bjornstad, Ottar N. ;
Kissler, Stephen ;
Simonsen, Lone ;
Grenfell, Bryan T. ;
Viboud, Cecile .
PLOS COMPUTATIONAL BIOLOGY, 2017, 13 (02)