The role of input imaging combination and ADC threshold on segmentation of acute ischemic stroke lesion using U-Net

被引:1
|
作者
Li, Ya-Hui [1 ,2 ]
Lin, Shao-Chieh [2 ,3 ]
Chung, Hsiao-Wen [1 ,4 ]
Chang, Chia-Ching [2 ,5 ]
Peng, Hsu-Hsia [6 ]
Huang, Teng-Yi [7 ]
Shen, Wu-Chung [8 ,9 ]
Tsai, Chon-Haw [10 ]
Lo, Yu-Chien [9 ]
Lee, Tung-Yang [11 ,12 ]
Juan, Cheng-Hsuan [11 ,12 ]
Juan, Cheng-En [12 ]
Chang, Hing-Chiu [14 ,15 ]
Liu, Yi-Jui [13 ]
Juan, Chun-Jung [2 ,6 ,8 ,9 ,16 ,17 ]
机构
[1] Natl Taiwan Univ, Grad Inst Biomed Elect & Bioinformat, Taipei, Taiwan
[2] China Med Univ, Hsinchu Hosp, Dept Med Imaging, 199,Sec 1,Xinglong Rd, Zhubei 302, Hsinchu, Taiwan
[3] Feng Chia Univ, Ph D Program Elect & Commun Engn, Taichung, Taiwan
[4] Natl Taiwan Univ, Dept Elect Engn, Taipei, Taiwan
[5] Natl Yang Ming Chiao Tung Univ, Dept Management Sci, Hsinchu, Taiwan
[6] Natl Tsing Hua Univ, Dept Biomed Engn & Environm Sci, Hsinchu, Taiwan
[7] Natl Taiwan Univ Sci & Technol, Dept Elect Engn, Taipei, Taiwan
[8] China Med Univ, Sch Med, Coll Med, Dept Radiol, Taichung, Taiwan
[9] Med Univ Hosp, Dept Med Imaging, Taichung, Taiwan
[10] China Med Univ Hosp, Dept Neurol, Taichung, Taiwan
[11] Cheng Ching Hosp, Taichung, Taiwan
[12] Feng Chia Univ, Masters Program Biomed Informat & Biomed Engn, Taichung, Taiwan
[13] Feng Chia Univ, Dept Automat Control Engn, 100 Wenhwa Rd, Taichung 40724, Taiwan
[14] Chinese Univ Hong Kong, Dept Biomed Engn, Shatin, ERB1112,11-F,William MW Mong Engn Bldg, Hong Kong, Peoples R China
[15] Chinese Univ Hong Kong, Multiscale Med Robot Ctr, Shatin, Hong Kong, Peoples R China
[16] Natl Def Med Ctr, Dept Biomed Engn, Taipei, Taiwan
[17] Natl Taiwan Univ, Dept Comp Sci & Informat Engn, Taipei, Taiwan
关键词
Ischemic Stroke; Diffusion Magnetic Resonance Imaging; Retrospective Study; Deep Learning; Neural Networks; Computer; DIFFUSION; DEEP; DIAGNOSIS; ARTIFACTS; IMAGES; VOLUME;
D O I
10.1007/s00330-023-09622-z
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
BackgroundTo evaluate the effect of the weighting of input imaging combo and ADC threshold on the performance of the U-Net and to find an optimized input imaging combo and ADC threshold in segmenting acute ischemic stroke (AIS) lesion.MethodsThis study retrospectively enrolled a total of 212 patients having AIS. Four combos, including ADC-ADC-ADC (AAA), DWI-ADC-ADC (DAA), DWI-DWI-ADC (DDA), and DWI-DWI-DWI (DDD), were used as input images, respectively. Three ADC thresholds including 0.6, 0.8 and 1.8 x 10(-3) mm(2)/s were applied. Dice similarity coefficient (DSC) was used to evaluate the segmentation performance of U-Nets. Nonparametric Kruskal-Wallis test with Tukey-Kramer post-hoc tests were used for comparison. A p < .05 was considered statistically significant.ResultsThe DSC significantly varied among different combos of images and different ADC thresholds. Hybrid U-Nets outperformed uniform U-Nets at ADC thresholds of 0.6 x 10(-3) mm(2)/s and 0.8 x 10(-3) mm(2)/s (p < .001). The U-Net with imaging combo of DDD had segmentation performance similar to hybrid U-Nets at an ADC threshold of 1.8 x 10(-3) mm(2)/s (p = .062 to 1). The U-Net using the imaging combo of DAA at the ADC threshold of 0.6 x 10(-3) mm(2)/s achieved the highest DSC in the segmentation of AIS lesion.ConclusionsThe segmentation performance of U-Net for AIS varies among the input imaging combos and ADC thresholds. The U-Net is optimized by choosing the imaging combo of DAA at an ADC threshold of 0.6 x 10(-3) mm(2)/s in segmentating AIS lesion with highest DSC.
引用
收藏
页码:6157 / 6167
页数:11
相关论文
共 50 条
  • [1] The role of input imaging combination and ADC threshold on segmentation of acute ischemic stroke lesion using U-Net
    Ya-Hui Li
    Shao-Chieh Lin
    Hsiao-Wen Chung
    Chia-Ching Chang
    Hsu-Hsia Peng
    Teng-Yi Huang
    Wu-Chung Shen
    Chon-Haw Tsai
    Yu-Chien Lo
    Tung-Yang Lee
    Cheng-Hsuan Juan
    Cheng-En Juan
    Hing-Chiu Chang
    Yi-Jui Liu
    Chun-Jung Juan
    European Radiology, 2023, 33 : 6157 - 6167
  • [2] U-ISLES: Ischemic Stroke Lesion Segmentation Using U-Net
    Cornelio, Lea Katrina S.
    del Castillo, Mary Abigail, V
    Naval, Prospero C., Jr.
    INTELLIGENT SYSTEMS AND APPLICATIONS, INTELLISYS, VOL 2, 2019, 869 : 326 - 336
  • [3] Automated Segmentation of Acute Ischemic Stroke Using Attention U-Net with Patch Mechanism
    Cinar, Necip
    Ucan, Murat
    Kaya, Buket
    Kaya, Mehmet
    ADVANCES IN ELECTRICAL AND COMPUTER ENGINEERING, 2025, 25 (01) : 29 - 42
  • [4] V-Net and U-Net for Ischemic Stroke Lesion Segmentation in a Small Dataset of Perfusion Data
    Pinheiro, Gustavo Retuci
    Voltoline, Raphael
    Bento, Mariana
    Rittner, Leticia
    BRAINLESION: GLIOMA, MULTIPLE SCLEROSIS, STROKE AND TRAUMATIC BRAIN INJURIES, BRAINLES 2018, PT I, 2019, 11383 : 301 - 309
  • [5] Automated segmentation of chronic stroke lesion using efficient U-Net architecture
    Shin, Hyunkwang
    Agyeman, Rockson
    Rafiq, Muhammad
    Chang, Min Cheol Chang
    Choi, Gyu Sang
    BIOCYBERNETICS AND BIOMEDICAL ENGINEERING, 2022, 42 (01) : 285 - 294
  • [6] Evaluation of U-net segmentation models for infarct volume measurement in acute ischemic stroke: comparison with fixed ADC threshold-based methods
    Kim, Yoon-Chul
    Lee, Ji-Eun
    Yu, Inwu
    Baek, In-Young
    Jeong, Han-Gil
    Kim, Beom-Joon
    Seong, Joon-Kyung
    Chung, Jong-Won
    Bang, Oh Young
    Seo, Woo-Keun
    MEDICAL IMAGING 2019: COMPUTER-AIDED DIAGNOSIS, 2019, 10950
  • [7] Hemorrhagic stroke lesion segmentation using a 3D U-Net with squeeze-and-excitation blocks
    Abramova, Valeriia
    Clerigues, Albert
    Quiles, Ana
    Figueredo, Deysi Garcia
    Silva, Yolanda
    Pedraza, Salvador
    Oliver, Arnau
    Llado, Xavier
    COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2021, 90
  • [8] Segmentation of weeds and crops using multispectral imaging and CRF-enhanced U-Net
    Sahin, Halil Mertkan
    Miftahushudur, Tajul
    Grieve, Bruce
    Yin, Hujun
    COMPUTERS AND ELECTRONICS IN AGRICULTURE, 2023, 211
  • [9] Brain Stroke Lesion Segmentation Using Computed Tomography Images based on Modified U-Net Model with ResNet Blocks
    Tursynova, Azhar
    Omarov, Batyrkhan
    Sakhipov, Aivar
    Tukenova, Natalya
    INTERNATIONAL JOURNAL OF ONLINE AND BIOMEDICAL ENGINEERING, 2022, 18 (13) : 97 - 112
  • [10] Skin Lesion Area Segmentation Using Attention Squeeze U-Net for Embedded Devices
    Pennisi, Andrea
    Bloisi, Domenico D.
    Suriani, Vincenzo
    Nardi, Daniele
    Facchiano, Antonio
    Giampetruzzi, Anna Rita
    JOURNAL OF DIGITAL IMAGING, 2022, 35 (05) : 1217 - 1230