In vitro and in silico characterization of a novel glutamate carboxypeptidase from Cohnella sp. A01

被引:3
|
作者
Naeemi, Seyed Mahdi [1 ]
Amizadeh, Saeed [2 ]
Sari, Soyar [1 ]
Nemati, Fahimeh [3 ]
Naseroleslami, Maryam [1 ]
机构
[1] Islamic Azad Univ, Fac Adv Sci & Technol, Dept Mol & Cellular Sci, Tehran Med Sci, Tehran, Iran
[2] Natl Inst Genet Engn & Biotechnol NIGEB, Inst Ind & Environm Biotechnol, Bioproc Engn Grp, Tehran, Iran
[3] Islamic Azad Univ, Fac Adv Sci & Technol, Dept Biotechnoligy, Tehran Med Sci, Tehran, Iran
关键词
Carboxypeptidase G; Cohnella A01; Folic acid; Glutamate; MOLECULAR-DYNAMICS; CRYSTAL-STRUCTURE; PROTEIN; ENZYME; PURIFICATION; FLUORESCENCE; MECHANISM; STABILIZATION; DENATURATION; METHOTREXATE;
D O I
10.1016/j.biochi.2022.12.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Glutamate carboxypeptidase is a bacterial enzyme of metallopeptidase superfamily. This enzyme is an exo-peptidase that catalyzes the hydrolysis of glutamate residues at the C-terminus of folic acid. The rCP302 is a novel zinc ion-dependent recombinant glutamate carboxypeptidase derived from a ther-mophilic bacterium, Cohnella sp. A01 (PTCC No: 1921). By simulating the structure of rCP302, analyzing its activity in various environmental settings, and contrasting it with that of related enzymes, we wanted to evaluate the heterologous production, purification, and characterization of this enzyme. The bioin-formatics study showed that rCP302 had maximum similarity to M20 family of metallopeptidases. The purified rCP302 molecular weight was about 41.6 kDa. The optimum temperature and pH for the catalytic activity of rCP302 were 50 degrees C and 7.2, respectively. Fluorescence spectroscopy data elucidated the sec-ondary structure of rCP302 and determined conformational changes caused by alterations in ambient conditions. Using folate as a substrate, Km and specific activity values were calculated as 0.108 mM and 687 mmol/min/mg, respectively. The enzyme activity was strongly inhibited when EDTA sequestered zinc ions. The half-life of this enzyme at 30 degrees C was 2012 min. Regarding the ability of rCP302 to degrade folic acid, and its long half-life at 37 degrees C, the normal temperature of many mammals, this enzyme can be introduced for further study for use in the pharmaceutical industry.(c) 2022 Elsevier B.V. and Societe Francaise de Biochimie et Biologie Moleculaire (SFBBM). All rights reserved.
引用
收藏
页码:83 / 95
页数:13
相关论文
共 50 条
  • [31] Molecular Characterization of a Novel N-Acetyltransferase from Chryseobacterium sp.
    Takenaka, Shinji
    Yoshida, Kenji
    Tanaka, Kosei
    Yoshida, Ken-ichi
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2014, 80 (05) : 1770 - 1776
  • [32] Biochemical characterization of a novel thermostable xyloglucanase from an alkalothermophilic Thermomonospora sp.
    Pol, Dipali
    Menon, Vishnu
    Rao, Mala
    EXTREMOPHILES, 2012, 16 (01) : 135 - 146
  • [33] Identification and characterization of ι-carrageenase from macroalgae-associated bacterium Microbulbifer sp. YNDZ01
    Zhang, Qian
    Gui, Yuanyuan
    Zhao, Luying
    Zhang, Ao
    Fu, Liping
    Cao, Zhe
    Li, Jiang
    JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 2023, 103 (12) : 6095 - 6104
  • [34] Purification and characterization of a novel thermostable α-L-arabinofuranosidase (α-L-AFase) from Chaetomium sp.
    Yan, Qiaojuan
    Tang, Luo
    Yang, Shaoqing
    Zhou, Peng
    Zhang, Shuping
    Jiang, Zhengqiang
    PROCESS BIOCHEMISTRY, 2012, 47 (03) : 472 - 478
  • [35] Molecular characterization of lipase from a psychrotrophic bacterium Pseudomonas sp. CRBC14
    Farooq, Saleem
    Ganai, Shabir Ahmad
    Ganai, Bashir Ahmad
    Mohan, Suma
    Uqab, Baba
    Nazir, Ruqeya
    CURRENT GENETICS, 2022, 68 (02) : 243 - 251
  • [36] The purification and characterization of a novel D(-)-specific carbamoylase enzyme from an Agrobacterium sp.
    Louwrier, A
    Knowles, CJ
    ENZYME AND MICROBIAL TECHNOLOGY, 1996, 19 (08) : 562 - 571
  • [37] A novel laccase from basidiomycete Cerrena sp.: Cloning, heterologous expression, and characterization
    Yang, Jie
    Ng, Tzi Bun
    Lin, Juan
    Ye, Xiuyun
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2015, 77 : 344 - 349
  • [38] Purification, Characterization, and Biocatalytic and Antibiofilm Activity of a Novel Dextranase from Talaromyces sp.
    Ebaya, Mahasen Mohamed Ahmed
    El-Mowafy, Mohammed
    Adel El-Sokkary, Mohamed Mohamed
    Hassan, Ramadan
    INTERNATIONAL JOURNAL OF MICROBIOLOGY, 2020, 2020
  • [39] Molecular Cloning, In Silico Analysis, and Characterization of a Novel Cellulose Microfibril Swelling Gene Isolated from Bacillus sp. Strain AY8
    Haque, Md. Azizul
    Barman, Dhirendra Nath
    Rahman, Aminur
    Hossain, Md. Shohorab
    Ghosh, Sibdas
    Nahar, Most. Aynun
    Nahar, Mst. Nur-E-Nazmun
    Saha, Joyanta K.
    Cho, Kye Man
    Yun, Han Dae
    MICROORGANISMS, 2023, 11 (12)
  • [40] Enzymatic Characterization of a Novel HSL Family IV Esterase EstD04 from Pseudomonas sp. D01 in Mealworm Gut Microbiota
    Kuan, Jung-En
    Tsai, Chih-Hsuan
    Chou, Chun-Chi
    Wu, Cindy
    Wu, Whei-Fen
    MOLECULES, 2023, 28 (14):