Data of de novo assembly and functional annotation of transcriptome of Peninsular Malaysian Amomum Roxb. species

被引:1
|
作者
Fareed, Fathmath Shaman [1 ]
Yen, Sam Yen [2 ]
Singaram, Nallammai [1 ]
机构
[1] Taylors Univ, Fac Hlth & Med Sci, Sch Biosci, Jalan Taylors, Subang Jaya 47500, Selangor, Malaysia
[2] Forest Res Inst, Kuala Lumpur 52109, Selangor, Malaysia
来源
DATA IN BRIEF | 2023年 / 50卷
关键词
Amomum; Peninsular Malaysia; RNA; Transcriptome data; De novo assembly;
D O I
10.1016/j.dib.2023.109507
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The Amomum genus comprises of perennial, tropical, herba-ceous plants that are distributed globally and possess both medicinal and ornamental properties. These plants contain a variety of secondary metabolites, including compounds with antioxidant and antimicrobial properties. This is the first transcriptomic analysis of seven Amomum species from Peninsular Malaysia, utilizing leaves, stems, and roots as sample material. Paired-end Illumina HiSeq technology was used for data generation which includes raw data, cleaned reads, de novo assembly, and functional annotation. The data is accessible via NCBI BioProject (PRJNA936673). & COPY; 2023 Published by Elsevier Inc. This is an open access article under the CC BY license ( http://creativecommons.org/licenses/by/4.0/ )
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页数:8
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