A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge

被引:5
作者
Bergquist, Timothy [1 ]
Wax, Marie [2 ]
Bennett, Tellen D. [3 ]
Moffitt, Richard A. [4 ]
Gao, Jifan [5 ]
Chen, Guanhua [5 ]
Telenti, Amalio [6 ]
Maher, M. Cyrus [6 ]
Bartha, Istvan [6 ]
Walker, Lorne [7 ]
Orwoll, Benjamin E. [7 ]
Mishra, Meenakshi [7 ]
Alamgir, Joy [8 ]
Cragin, Bruce L. [9 ]
Ferguson, Christopher H. [2 ]
Wong, Hui-Hsing [2 ]
Deslattes Mays, Anne [10 ]
Misquitta, Leonie [11 ]
DeMarco, Kerry A. [2 ]
Sciarretta, Kimberly L. [2 ]
Patel, Sandeep A. [2 ]
机构
[1] Sage Bionetworks, Seattle, WA USA
[2] United States Dept Hlth & Human Serv, Adm Strateg Preparedness & Response, Biomed Adv Res & Dev Author, Washington, DC 20201 USA
[3] Univ Colorado, Sch Med, Aurora, CO USA
[4] Sunny Stony Brook, Stony Brook, NY USA
[5] Univ Wisconsin Madison, Madison, WI USA
[6] Vir Biotechnol, San Francisco, CA USA
[7] Oregon Hlth & Sci Univ, Portland, OR USA
[8] ARISci, Wayland, MA USA
[9] Wind City Appl Res, Lempster, NH USA
[10] United States Dept Hlth & Human Serv, Eunice Kennedy Shriver Natl Inst Child Hlth & Huma, NIH, Bethesda, MD USA
[11] United States Dept Hlth & Human Serv, Natl Ctr Adv Translat Sci, NIH, Bethesda, MD USA
关键词
Pediatrics; COVID-19; community challenges; machine learning; evaluation;
D O I
10.1017/cts.2023.549
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Introduction:With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources effectively. While the overwhelming majority of pediatric infections are mild, there have been life-threatening exceptions that illuminated the need to proactively identify pediatric patients at risk of severe COVID-19 and other respiratory infectious diseases. However, a nationwide capability for developing validated computational tools to identify pediatric patients at risk using real-world data does not exist. Methods:HHS ASPR BARDA sought, through the power of competition in a challenge, to create computational models to address two clinically important questions using the National COVID Cohort Collaborative: (1) Of pediatric patients who test positive for COVID-19 in an outpatient setting, who are at risk for hospitalization? (2) Of pediatric patients who test positive for COVID-19 and are hospitalized, who are at risk for needing mechanical ventilation or cardiovascular interventions? Results:This challenge was the first, multi-agency, coordinated computational challenge carried out by the federal government as a response to a public health emergency. Fifty-five computational models were evaluated across both tasks and two winners and three honorable mentions were selected. Conclusion:This challenge serves as a framework for how the government, research communities, and large data repositories can be brought together to source solutions when resources are strapped during a pandemic.
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页数:10
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