Understanding large scale sequencing datasets through changes to protein folding

被引:1
|
作者
Shorthouse, David [1 ]
Lister, Harris [2 ]
Freeman, Gemma S. [2 ]
Hall, Benjamin A. [2 ]
机构
[1] UCL, Sch Pharm, 29-39 Brunswick Sq, London WC1N 1AX, England
[2] UCL, Dept Med Phys & Biomed Engn, Malet Pl Engn Bldg,Gower St, London WC1E 6BT, England
关键词
genomics; mutation; folding; DDG; structure; HEREDITARY LEIOMYOMATOSIS; MUTATIONS; CANCER; GUIDELINES; DIAGNOSIS; REVEALS; SERVER;
D O I
10.1093/bfgp/elae007
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The expansion of high-quality, low-cost sequencing has created an enormous opportunity to understand how genetic variants alter cellular behaviour in disease. The high diversity of mutations observed has however drawn a spotlight onto the need for predictive modelling of mutational effects on phenotype from variants of uncertain significance. This is particularly important in the clinic due to the potential value in guiding clinical diagnosis and patient treatment. Recent computational modelling has highlighted the importance of mutation induced protein misfolding as a common mechanism for loss of protein or domain function, aided by developments in methods that make large computational screens tractable. Here we review recent applications of this approach to different genes, and how they have enabled and supported subsequent studies. We further discuss developments in the approach and the role for the approach in light of increasingly high throughput experimental approaches.
引用
收藏
页码:517 / 524
页数:8
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