A new blood based epigenetic age predictor for adolescents and young adults

被引:15
作者
Aanes, Havard [1 ]
Bleka, Oyvind [1 ]
Dahlberg, Pal Skage [1 ]
Carm, Kristina Totland [1 ]
Lehtimaki, Terho [2 ,3 ]
Raitakari, Olli [4 ,5 ,6 ,7 ]
Kahonen, Mika [8 ,9 ]
Hurme, Mikko [10 ,11 ]
Rolseth, Veslemoy [1 ]
机构
[1] Oslo Univ Hosp, Dept Forens Sci, Div Lab Med, POB 4950, N-0424 Oslo, Norway
[2] Tampere Univ, Dept Clin Chem, Fimlab Labs, Tampere, Finland
[3] Tampere Univ, Fac Med & Hlth Technol, Finnish Cardiovasc Res Ctr Tampere, Tampere, Finland
[4] Univ Turku, Ctr Populat Hlth Res, Turku, Finland
[5] Turku Univ Hosp, Turku, Finland
[6] Univ Turku, Res Ctr Appl & Prevent Cardiovasc Med, Turku, Finland
[7] Turku Univ Hosp, Dept Clin Physiol & Nucl Med, Turku, Finland
[8] Tampere Univ Hosp, Fac Med & Hlth Technol, Dept Clin Physiol, Tampere, Finland
[9] Tampere Univ, Finnish Cardiovasc Res Ctr Tampere, Tampere, Finland
[10] Tampere Univ, Fac Med & Hlth Technol, Tampere, Finland
[11] Tampere Univ Hosp, Tampere, Finland
基金
芬兰科学院; 欧洲研究理事会;
关键词
EPIGENOME-WIDE ASSOCIATION; DNA METHYLATION;
D O I
10.1038/s41598-023-29381-7
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Children have special rights for protection compared to adults in our society. However, more than 1/4 of children globally have no documentation of their date of birth. Hence, there is a pressing need to develop biological methods for chronological age prediction, robust to differences in genetics, psychosocial events and physical living conditions. At present, DNA methylation is the most promising biological biomarker applied for age assessment. The human genome contains around 28 million DNA methylation sites, many of which change with age. Several epigenetic clocks accurately predict chronological age using methylation levels at age associated GpG-sites. However, variation in DNA methylation increases with age, and there is no epigenetic clock specifically designed for adolescents and young adults. Here we present a novel age Predictor for Adolescents and Young Adults (PAYA), using 267 CpG methylation sites to assess the chronological age of adolescents and young adults. We compared different preprocessing approaches and investigated the effect on prediction performance of the epigenetic clock. We evaluated performance using an independent validation data set consisting of 18-year-old individuals, where we obtained a median absolute deviation of just below 0.7 years. This tool may be helpful in age assessment of adolescents and young adults. However, there is a need to investigate the robustness of the age predictor across geographical and disease populations as well as environmental effects.
引用
收藏
页数:10
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