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Insights into gene tissue specificity and protein-protein interactions in the context of purifying selection in humans
被引:0
|作者:
Mezzavilla, Massimo
[1
,2
,3
]
Cocca, Massimiliano
[1
]
机构:
[1] Univ Padua, Dept Biol, Padua, Italy
[2] IRCCS Burlo Garofolo, Inst Maternal & Child Hlth, Trieste, Italy
[3] Via Ugo Bassi 58-B, I-35128 Padua, Italy
关键词:
protein-protein interactions;
purifying selection;
tissue specificity;
D O I:
10.1111/ahg.12497
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Background: How much are natural selection and gene characteristics, such as the number of protein-protein interactions (PPIs), tissue specificity (tau), and expression level, connected? Methods: In order to investigate these relationships, we combined different metrics linked to genetic constraints and analyzed their distribution concerning PPIs, tau and expression levels. Results: We discovered a positive correlation between genetic constraints, PPIs, and expression levels in all tissues. On the other hand, we obtained a negative correlation between genetic constraints and tau. Furthermore, the fraction of variance in PPI and tau explained by the constraints metrics is around 6% and 10%, respectively. Conclusions: We observed that the variance of expression of tissue-specific genes seems not related to their level of selection constraints, which is the opposite of what is found on non-tissue-specific genes. Overall these observations would help to elucidate the relationship between natural selection and gene features.
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页码:75 / 79
页数:5
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