Construction of a ferroptosis-based prognostic model for breast cancer helps to discriminate high/low risk groups and treatment priority

被引:2
|
作者
Zhang, Liyong [1 ]
Zhao, Tingting [1 ]
Wu, Xiujuan [1 ]
Tian, Hao [1 ]
Gao, Pingping [1 ]
Chen, Qingqiu [1 ]
Chen, Ceshi [2 ]
Zhang, Yi [1 ]
Wang, Shushu [1 ]
Qi, Xiaowei [1 ]
Sun, Na [1 ]
机构
[1] Army Med Univ, Southwest Hosp, Dept Breast & Thyroid Surg, Chongqing, Peoples R China
[2] Chinese Academyof Sci, Kunming Inst Zool, Chinese Acad Sci & Yunnan Prov, Key Lab Anim Models& Human Dis Mech, Kunming, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2023年 / 14卷
关键词
ferroptosis; breast cancer; prognostic model; TCGA; GEO; CELL-DEATH; NRF2; RESISTANCE;
D O I
10.3389/fimmu.2023.1264206
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
IntroductionBreast cancer is a common malignant tumor associated with high morbidity and mortality. The role of ferroptosis, a regulated form of cell death, in breast cancer development and prognosis remains unclear. This study aims to investigate the relationship between ferroptosis-related genes and breast cancer and develop a prognostic model.MethodsRNA-seq expression datasets and clinical samples of breast cancer patients were obtained from public databases. Immunity- and drug resistance-related data were integrated. A preliminary screening was performed, resulting in the identification of 73 candidate ferroptosis factors. Univariate Cox regression analysis was conducted to select 12 genes, followed by LASSO Cox regression analysis to construct a prognostic risk prediction model consisting of 10 ferroptosis-related genes. The model was further characterized by immune cell infiltration. The expression levels of ferroptosis-related genes were validated in human breast cancer cell lines, and immunohistochemical (IHC) analysis was conducted on cancer specimens to assess ferroptosis-related protein expression.Results:The study identified 10 ferroptosis-related genes that were significantly associated with breast cancer prognosis. The constructed prognostic risk prediction model showed potential for predicting the prognostic value of these genes. In addition, the infiltration of immune cells was observed to be a characteristic of the model. The expression levels of ferroptosis-related genes were confirmed in human breast cancer cell lines, and IHC analysis provided evidence of ferroptosis-related protein expression in cancer specimens.DiscussionThis study provides a novel prognostic model for breast cancer, incorporating 10 ferroptosis-related genes. The model demonstrates the potential for predicting breast cancer prognosis and highlights the involvement of immune cell infiltration. The expression levels of ferroptosis-related genes and proteins further support the association between ferroptosis and breast cancer development.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Analysis of a new therapeutic target and construction of a prognostic model for breast cancer based on ferroptosis genes
    Li, Qi
    Liu, Hengchen
    Jin, Yun
    Yu, Yuanquan
    Wang, Yihang
    Wu, Di
    Guo, Yinghao
    Xi, Longfu
    Ye, Dan
    Pan, Yanzhi
    Zhang, Xiaoxiao
    Li, Jiangtao
    COMPUTERS IN BIOLOGY AND MEDICINE, 2023, 165
  • [2] Construction of a Prognostic Risk Prediction Model for Obesity Combined With Breast Cancer
    Sun, Na
    Ma, Dandan
    Gao, Pingping
    Li, Yanling
    Yan, Zexuan
    Peng, Zaihui
    Han, Fei
    Zhang, Yi
    Qi, Xiaowei
    FRONTIERS IN ENDOCRINOLOGY, 2021, 12
  • [3] Construction and validation of a prognostic risk model for breast cancer based on protein expression
    Huang, Bo
    Zhang, Xujun
    Cao, Qingyi
    Chen, Jianing
    Lin, Chenhong
    Xiang, Tianxin
    Zeng, Ping
    BMC MEDICAL GENOMICS, 2022, 15 (01)
  • [4] Defining three ferroptosis-based molecular subtypes and developing a prognostic risk model for high-grade serous ovarian cancer
    Sun, Xiang
    He, Wenbin
    Lin, Baohua
    Huang, Weiming
    Ye, Danping
    AGING-US, 2024, 16 (10): : 9106 - 9126
  • [5] Prognostic Model Construction and Immune Microenvironment Analysis of Breast Cancer Based on Ferroptosis-Related lncRNAs
    Li Jia, Cong
    Yang, Fu
    Li, Ruining
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2021, 14 : 9817 - 9831
  • [6] Construction and validation of a prognostic risk model for breast cancer based on protein expression
    Bo Huang
    Xujun Zhang
    Qingyi Cao
    Jianing Chen
    Chenhong Lin
    Tianxin Xiang
    Ping Zeng
    BMC Medical Genomics, 15
  • [7] Construction of a prognostic model for breast cancer based on moonlighting genes
    Zhang, Ming
    Zhang, Dejie
    Wang, Qicai
    Lin, Guoliang
    HUMAN MOLECULAR GENETICS, 2024, 33 (12) : 1023 - 1035
  • [8] Construction of Ovarian Cancer Prognostic Model Based on the Investigation of Ferroptosis-Related lncRNA
    Yang, Shaoyi
    Ji, Jie
    Wang, Meng
    Nie, Jinfu
    Wang, Shujie
    BIOMOLECULES, 2023, 13 (02)
  • [9] A Novel Clinical Prognostic Model for Breast Cancer Patients with Malignant Pleural Effusion: Avoiding Chemotherapy in Low-Risk Groups?
    Wang, Yichen
    Zhou, Tao
    Zhao, Shanshan
    Li, Ning
    Sun, Siwen
    Li, Man
    CANCER MANAGEMENT AND RESEARCH, 2023, 15 : 409 - 422
  • [10] Exploration of prognostic genes and risk signature in breast cancer patients based on RNA binding proteins associated with ferroptosis
    Chen, Xiang
    Yang, Changcheng
    Wang, Wei
    He, Xionghui
    Sun, Hening
    Lyu, Wenzhi
    Zou, Kejian
    Fang, Shuo
    Dai, Zhijun
    Dong, Huaying
    FRONTIERS IN GENETICS, 2023, 14