Splicing analysis of RNAseq data using IntEREst R/ Bioconductor package (V1.24.0)

被引：0
作者：
Oghabian, Ali [1 ,2 ]
Frilander, Mikko [3 ]
Savarese, Marco [1 ,2 ]
机构：
[1] Folkhalsan Res Ctr, Helsinki, Finland
[2] Univ Helsinki, Helsinki, Finland
[3] Univ Helsinki, Inst Biotechnol, Helsinki, Finland
来源：
EUROPEAN JOURNAL OF HUMAN GENETICS | 2024年 / 32卷
关键词：
D O I：
暂无
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
P18.031.C
引用
收藏
页码：658 / 658
页数：1
相关论文
共 50 条
[41]   Assessing the quality of comparative genomics data and results with the cogeqc R/Bioconductor package [J].
Almeida-Silva, Fabricio ;
Van de Peer, Yves .
METHODS IN ECOLOGY AND EVOLUTION, 2023, 14 (12) :2942-2952
[42]   CTCF: an R/bioconductor data package of human and mouse CTCF binding sites [J].
Dozmorov, Mikhail G. ;
Mu, Wancen ;
Davis, Eric S. ;
Lee, Stuart ;
Triche, Timothy J. ;
Phanstiel, Douglas H. ;
Love, Michael, I .
BIOINFORMATICS ADVANCES, 2022, 2 (01)
[43]   GeneTonic: an R/Bioconductor package for streamlining the interpretation of RNA-seq data [J].
Federico Marini ;
Annekathrin Ludt ;
Jan Linke ;
Konstantin Strauch .
BMC Bioinformatics, 22
[44]   A protocol for RNA methylation differential analysis with MeRIP-Seq data and exomePeak R/Bioconductor package [J].
Meng, Jia ;
Lu, Zhiliang ;
Liu, Hui ;
Zhang, Lin ;
Zhang, Shaowu ;
Chen, Yidong ;
Rao, Manjeet K. ;
Huang, Yufei .
METHODS, 2014, 69 (03) :274-281
[45]   Pathview: an R/Bioconductor package for pathway-based data integration and visualization [J].
Luo, Weijun ;
Brouwer, Cory .
BIOINFORMATICS, 2013, 29 (14) :1830-1831
[46]   spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data [J].
Brenda Pardo ;
Abby Spangler ;
Lukas M. Weber ;
Stephanie C. Page ;
Stephanie C. Hicks ;
Andrew E. Jaffe ;
Keri Martinowich ;
Kristen R. Maynard ;
Leonardo Collado-Torres .
BMC Genomics, 23
[47]   karyoploteR: an R/Bioconductor package to plot customizable genomes displaying arbitrary data [J].
Gel, Bernat ;
Serra, Eduard .
BIOINFORMATICS, 2017, 33 (19) :3088-3090
[48]   spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data [J].
Pardo, Brenda ;
Spangler, Abby ;
Weber, Lukas M. ;
Page, Stephanie C. ;
Hicks, Stephanie C. ;
Jaffe, Andrew E. ;
Martinowich, Keri ;
Maynard, Kristen R. ;
Collado-Torres, Leonardo .
BMC GENOMICS, 2022, 23 (01)
[49]   NanoMethViz: An R/Bioconductor package for visualizing long-read methylation data [J].
Su, Shian ;
Gouil, Quentin ;
Blewitt, Marnie E. ;
Cook, Dianne ;
Hickey, Peter F. ;
Ritchie, Matthew E. .
PLOS COMPUTATIONAL BIOLOGY, 2021, 17 (10)
[50]   GeneTonic: an R/Bioconductor package for streamlining the interpretation of RNA-seq data [J].
Marini, Federico ;
Ludt, Annekathrin ;
Linke, Jan ;
Strauch, Konstantin .
BMC BIOINFORMATICS, 2021, 22 (01)
12345