Bringing Structure to Cell Biology with Cryo-Electron Tomography

被引:47
作者
Young, Lindsey N. [1 ]
Villa, Elizabeth [1 ,2 ]
机构
[1] Univ Calif San Diego, Dept Mol Biol, La Jolla, CA 92037 USA
[2] Univ Calif San Diego, Howard Hughes Med Inst, La Jolla, CA 92037 USA
基金
美国国家卫生研究院;
关键词
cryo-electron tomography; in situ structural biology; quantitative cell biology; biophysical modeling; molecular architecture; MEAN FREE-PATH; IN-SITU; 3-DIMENSIONAL RECONSTRUCTION; ELECTRON TOMOGRAPHY; MICROSCOPY; COMPLEX; FLUORESCENCE; RESOLUTION; ORGANIZATION; PROTEASOMES;
D O I
10.1146/annurev-biophys-111622-091327
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Recent advances in cryo-electron microscopy have marked only the beginning of the potential of this technique. To bring structure into cell biology, the modality of cryo-electron tomography has fast developed into a bona fide in situ structural biology technique where structures are determined in their native environment, the cell. Nearly every step of the cryo-focused ion beam-assisted electron tomography (cryo-FIB-ET) workflow has been improved upon in the past decade, since the first windows were carved into cells, unveiling macromolecular networks in near-native conditions. By bridging structural and cell biology, cryo-FIB-ET is advancing our understanding of structure-function relationships in their native environment and becoming a tool for discovering new biology.
引用
收藏
页码:573 / 595
页数:23
相关论文
共 167 条
[1]   Comprehensive structure and functional adaptations of the yeast nuclear pore complex [J].
Akey, Christopher W. ;
Singh, Digvijay ;
Ouch, Christna ;
Echeverria, Ignacia ;
Nudelman, Ilona ;
Varberg, Joseph M. ;
Yu, Zulin ;
Fang, Fei ;
Shi, Yi ;
Wang, Junjie ;
Salzberg, Daniel ;
Song, Kangkang ;
Xu, Chen ;
Gumbart, James C. ;
Suslov, Sergey ;
Unruh, Jay ;
Jaspersen, Sue L. ;
Chait, Brian T. ;
Sali, Andrej ;
Fernandez-Martinez, Javier ;
Ludtke, Steven J. ;
Villa, Elizabeth ;
Rout, Michael P. .
CELL, 2022, 185 (02) :361-+
[2]   Proteasomes tether to two distinct sites at the nuclear pore complex [J].
Albert, Sahradha ;
Schaffer, Miroslava ;
Beck, Florian ;
Mosalaganti, Shyamal ;
Asano, Shoh ;
Thomas, Henry F. ;
Plitzko, Juergen M. ;
Beck, Martin ;
Baumeister, Wolfgang ;
Engel, Benjamin D. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (52) :13726-13731
[3]   In-cell architecture of the nuclear pore and snapshots of its turnover [J].
Allegretti, Matteo ;
Zimmerli, Christian E. ;
Rantos, Vasileios ;
Wilfling, Florian ;
Ronchi, Paolo ;
Fung, Herman K. H. ;
Lee, Chia-Wei ;
Hagen, Wim ;
Turonova, Beata ;
Karius, Kai ;
Boermel, Mandy ;
Zhang, Xiaojie ;
Mueller, Christoph W. ;
Schwab, Yannick ;
Mahamid, Julia ;
Pfander, Boris ;
Kosinski, Jan ;
Beck, Martin .
NATURE, 2020, 586 (7831) :796-+
[4]   A molecular census of 26S proteasomes in intact neurons [J].
Asano, Shoh ;
Fukuda, Yoshiyuki ;
Beck, Florian ;
Aufderheide, Antje ;
Foerster, Friedrich ;
Danev, Radostin ;
Baumeister, Wolfgang .
SCIENCE, 2015, 347 (6220) :439-442
[5]  
Bäuerlein FJB, 2022, bioRxiv, DOI [10.1101/2021.04.14.437159, 10.1101/2021.04.14.437159, DOI 10.1101/2021.04.14.437159]
[6]  
Barad B.A., 2022, bioRxiv, DOI [10.1101/2022.01.23.477440, DOI 10.1101/2022.01.23.477440]
[7]   Protein Secondary Structure Determination by Constrained Single-Particle Cryo-Electron Tomography [J].
Bartesaghi, Alberto ;
Lecumberry, Federico ;
Sapiro, Guillermo ;
Subramaniam, Sriram .
STRUCTURE, 2012, 20 (12) :2003-2013
[8]   Cryo-electron tomography: A long journey to the inner space of cells [J].
Baumeister, Wolfgang .
CELL, 2022, 185 (15) :2649-2652
[9]   Nuclear pore complex structure and dynamics revealed by cryoelectron tomography [J].
Beck, M ;
Förster, F ;
Ecke, M ;
Plitzko, JM ;
Melchior, F ;
Gerisch, G ;
Baumeister, W ;
Medalia, O .
SCIENCE, 2004, 306 (5700) :1387-1390
[10]  
Bell JM, 2018, MICROSC MICROANAL, V24, P866, DOI 10.1017/s1431927618004828