Comprehensive Analysis Reveals the Potential Roles of Transcription Factor Dp-1 in Lung Adenocarcinoma

被引:5
作者
Song, Yipeng [1 ]
Ma, Rongna [2 ]
机构
[1] East China Univ Polit Sci & Law, Songjiang Univ Town, Sch Law & Criminal Justice, Shanghai 201620, Peoples R China
[2] Shanghai Blood Ctr, Shanghai Inst Blood Transfus, Shanghai 200051, Peoples R China
关键词
TFDP1; Omics analysis; Prognostic biomarker; Thera-peutic target; Lung adenocarcinoma; HUMAN BREAST-CANCER; DNA METHYLATION; SURVIVAL; TFDP1; IDENTIFICATION; AMPLIFICATION; COMPONENT; TARGETS; SERVER; TOOL;
D O I
10.14740/wjon1595
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Transcription factor Dp-1 (TFDP1) was overexpressed and interacted with other genes to impact multiple signaling pathways in various human cancers. However, there is less research about the TFDP1 specific roles in lung adenocarcinoma (LUAD). Methods: We first explored TFDP1 expression levels and relative diseases from a pan-cancer perspective using the ONCOMINE, TIMER, and Open Targets Platform databases. Then, we used UAL-CAN, GEPIA 2, TCGA-LUAD data, and Kaplan-Meier plotter to ex-amine TFDP1 clinicopathological features and prognosis in LUAD patients. Genomic alterations and DNA methylation analysis were performed by cBioPortal and MethSurv, respectively. Then, we used a cancer single-cell state atlas (CancerSEA) to find TFDP1 functions at a single-cell resolution. LinkedOmics was used to find TFDP1 coexpressed genes, biological processes, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. Then, Gene Set Cancer Analysis (GSCA) was used to examine the drug resistence of TFDP1 in LUAD. Results: We found that TFDP1 was overexpressed in most human cancers and related to various diseases, including LUAD. Moreover, LUAD patients with high TFDP1 expression levels might be signifi-cantly associated with individual cancer stages and have a poor prog-nosis. Multivariate analysis revealed that the American Joint Com-mittee on Cancer (AJCC) pathologic stage, AJCC stage T, and AJCC stage N were the independent prognostic factors. LUAD patients with TFDP1 alterations suggested poor overall survival (OS), and disease-free survival (DFS), while hypermethylation might lead to a good prognosis. TFDP1 and its coexpressed genes were enriched in multi-ple signaling pathways and biological processes involved in the cell cycle, spliceosome, and DNA replication. Furthermore, TFDP1 was strongly positively related to the half-maximal inhibitory concentra-tion (IC50) values of multiple drugs.Conclusions: In summary, TFDP1 was a possible biomarker and po-tential therapeutic target for LUAD patients.
引用
收藏
页码:205 / 223
页数:19
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