Environmental gradients reveal stress hubs pre-dating plant terrestrialization

被引:47
作者
Dadras, Armin [1 ]
Fuerst-Jansen, Janine M. R. [1 ,2 ]
Darienko, Tatyana [1 ]
Krone, Denis [1 ]
Scholz, Patricia [3 ]
Sun, Siqi [4 ]
Herrfurth, Cornelia [3 ,5 ]
Rieseberg, Tim P. [1 ]
Irisarri, Iker [1 ,2 ,6 ]
Steinkamp, Rasmus [1 ]
Hansen, Maike [7 ,8 ,16 ]
Buschmann, Henrik [9 ]
Valerius, Oliver [10 ,11 ,12 ]
Braus, Gerhard H. [10 ,11 ,12 ]
Hoecker, Ute [7 ,8 ]
Feussner, Ivo [3 ,5 ,13 ]
Mutwil, Marek [14 ]
Ischebeck, Till [4 ]
de Vries, Sophie [1 ]
Lorenz, Maike [15 ]
de Vries, Jan [1 ,2 ,17 ]
机构
[1] Univ Goettingen, Inst Microbiol & Genet, Dept Appl Bioinformat, Gottingen, Germany
[2] Univ Goettingen, Campus Inst Data Sci, Gottingen, Germany
[3] Univ Goettingen, Albrecht von Haller Inst Plant Sci, Dept Plant Biochem, Gottingen, Germany
[4] Univ Munster, Inst Plant Biol & Biotechnol, Green Biotechnol, Munster, Germany
[5] Univ Goettingen, Goettingen Ctr Mol Biosci, Serv Unit Metabol & Lipid, Gottingen, Germany
[6] Museum Nat, Leibniz Inst Anal Biodivers Change, Ctr Mol Biodivers Res, Sect Phylogen, D-20146 Hamburg, Germany
[7] Univ Cologne, Inst Plant Sci, Cologne, Germany
[8] Univ Cologne, Cluster Excellence Plant Sci, Bioctr, Cologne, Germany
[9] Univ Appl Sci Mittweida, Fac Appl Comp Sci & Biosci, Sect Biotechnol & Chem, Mol Biotechnol, Mittweida, Germany
[10] Univ Goettingen, Inst Microbiol & Genet, Gottingen, Germany
[11] Univ Goettingen, Gottingen Ctr Mol Biosci, Gottingen, Germany
[12] Univ Goettingen, Dept Mol Microbiol & Genet, Serv Unit LCMS Prot Analyt, Gottingen, Germany
[13] Univ Goettingen, Goettingen Ctr Mol Biosci, Dept Plant Biochem, Gottingen, Germany
[14] Nanyang Technol Univ, Sch Biol Sci, Singapore, Singapore
[15] Univ Goettingen, Albrecht von Haller Inst Plant Sci, Dept Expt Phycol & SAG Culture Collect Algae, Gottingen, Germany
[16] Univ Goettingen, SAG Culture Collect Algae, Gottingen, Germany
[17] Univ Goettingen, Goettingen Ctr Mol Biosci GZMB, Dept Appl Bioinformat, Gottingen, Germany
基金
欧洲研究理事会;
关键词
ORIENTED CELL EXPANSION; LAND PLANTS; DIFFERENTIAL EXPRESSION; SIGNAL-TRANSDUCTION; STREPTOPHYTE ALGAE; GENOME SEQUENCE; GENE-EXPRESSION; ARABIDOPSIS; PROTEIN; EVOLUTION;
D O I
10.1038/s41477-023-01491-0
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Plant terrestrialization brought forth the land plants (embryophytes). Embryophytes account for most of the biomass on land and evolved from streptophyte algae in a singular event. Recent advances have unravelled the first full genomes of the closest algal relatives of land plants; among the first such species was Mesotaenium endlicherianum. Here we used fine-combed RNA sequencing in tandem with a photophysiological assessment on Mesotaenium exposed to a continuous range of temperature and light cues. Our data establish a grid of 42 different conditions, resulting in 128 transcriptomes and similar to 1.5 Tbp (similar to 9.9 billion reads) of data to study the combinatory effects of stress response using clustering along gradients. Mesotaenium shares with land plants major hubs in genetic networks underpinning stress response and acclimation. Our data suggest that lipid droplet formation and plastid and cell wall-derived signals have denominated molecular programmes since more than 600 million years of streptophyte evolution-before plants made their first steps on land.
引用
收藏
页码:1419 / +
页数:32
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