Development and Application of Automated Vocal Fold Tracking Software in a Rat Surgical Model

被引:0
作者
Pennington-FitzGerald, William [1 ]
Joshi, Abhinav [2 ]
Honzel, Emily [1 ]
Hernandez-Morato, Ignacio [2 ]
Pitman, Michael J. [2 ]
Moayedi, Yalda [2 ,3 ,4 ]
机构
[1] Columbia Univ, Coll Phys & Surg, New York, NY USA
[2] Columbia Univ, Irving Med Ctr, Ctr Voice & Swallowing, Dept Otolaryngol Head & Neck Surg, New York, NY USA
[3] Columbia Univ, Dept Neurol, New York, NY USA
[4] 180 Ft Washington Ave 8-844, New York, NY 10032 USA
基金
美国国家卫生研究院;
关键词
vocal fold paralysis; artificial intelligence; automated tracking; rat; recurrent laryngeal nerve injury; RECURRENT LARYNGEAL NERVE; NEUROTROPHIC FACTOR; MUSCLES; INJURY; RECOVERY; SEGMENTATION; LOCALIZATION; IMPACT; VOICE;
D O I
10.1002/lary.30930
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Objective: The rat is a widely used model for studying vocal fold (VF) function after recurrent laryngeal nerve injury, but common techniques for evaluating rat VF motion remain subjective and imprecise. To address this, we developed a software package, called RatVocalTracker1.0 (RVT1.0), to quantify VF motion and tested it on rats with iatrogenic unilateral vocal fold paralysis (VFP).Methods: A deep neural network was trained to identify the positions of the VFs and arytenoid cartilages (ACs) in trans -oral laryngoscope videos of the rat glottis. Software was developed to estimate glottic midline, VF displacement, VF velocity, and AC angle. The software was applied to laryngoscope videos of adult rats before and after right recurrent and superior laryngeal nerve transection (N = 15; 6M, 9F). All software calculated metrics were compared before and after injury and validated against manually calculated metrics.Results: RVT1.0 accurately tracked and quantified VF displacement, VF velocity, and AC angle. Significant differences were found before and after surgery for all RVT1.0 calculated metrics. There was strong agreement between programmatically and manually calculated measures. Automated analysis was also more efficient than nearly all manual methods.Conclusion: This approach provides fast, accurate assessment of VF motion in rats with minimal labor and allows for quantitative comparison of lateral differences in movement. Through this novel analysis method, we can differentiate healthy movement from unilateral VFP. RVT1.0 is open-source and will be a valuable tool for researchers using the rat model for laryn-gology research.
引用
收藏
页码:340 / 346
页数:7
相关论文
共 52 条
  • [1] An Open-Source Computer Vision Tool for Automated Vocal Fold Tracking From Videoendoscopy
    Adamian, Nat
    Naunheim, Matthew R.
    Jowett, Nate
    [J]. LARYNGOSCOPE, 2021, 131 (01) : E219 - E225
  • [2] Consequence of Dysphagia in the Hospitalized Patient Impact on Prognosis and Hospital Resources
    Altman, Kenneth W.
    Yu, Gou-Pei
    Schaefer, Steven D.
    [J]. ARCHIVES OF OTOLARYNGOLOGY-HEAD & NECK SURGERY, 2010, 136 (08) : 784 - 789
  • [3] Two step convolutional neural network for automatic glottis localization and segmentation in stroboscopic videos
    Belagali, Varun
    Rao, Achuth M., V
    Gopikishore, Pebbili
    Krishnamurthy, Rahul
    Ghosh, Prasanta Kumar
    [J]. BIOMEDICAL OPTICS EXPRESS, 2020, 11 (08) : 4695 - 4713
  • [4] Functional Regeneration of Recurrent Laryngeal Nerve Injury During Thyroid Surgery Using an Asymmetrically Porous Nerve Guide Conduit in an Animal Model
    Choi, Jeong-Seok
    Oh, Se Heang
    An, Hye-Young
    Kim, Young-Mo
    Lee, Jin Ho
    Lim, Jae-Yol
    [J]. THYROID, 2014, 24 (01) : 52 - 59
  • [5] deeplabcut.github, DEEPLABCUT US GUID S
  • [6] DeVore EK., 2022, LARYNGOSCOPE
  • [7] Re-Training of Convolutional Neural Networks for Glottis Segmentation in Endoscopic High-Speed Videos
    Doellinger, Michael
    Schraut, Tobias
    Henrich, Lea A.
    Chhetri, Dinesh
    Echternach, Matthias
    Johnson, Aaron M.
    Kunduk, Melda
    Maryn, Youri
    Patel, Rita R.
    Samlan, Robin
    Semmler, Marion
    Schuetzenberger, Anne
    [J]. APPLIED SCIENCES-BASEL, 2022, 12 (19):
  • [8] Fully automatic segmentation of glottis and vocal folds in endoscopic laryngeal high-speed videos using a deep Convolutional LSTM Network
    Fehling, Mona Kirstin
    Grosch, Fabian
    Schuster, Maria Elke
    Schick, Bernhard
    Lohscheller, Joerg
    [J]. PLOS ONE, 2020, 15 (02):
  • [9] Life Experience of Patients With Unilateral Vocal Fold Paralysis
    Francis, David O.
    Sherman, Ariel E.
    Hovis, Kristen L.
    Bonnet, Kemberlee
    Schlundt, David
    Garrett, C. Gaelyn
    Davies, Louise
    [J]. JAMA OTOLARYNGOLOGY-HEAD & NECK SURGERY, 2018, 144 (05) : 433 - 439
  • [10] BAGLS, a multihospital Benchmark for Automatic Glottis Segmentation
    Gomez, Pablo
    Kist, Andreas M.
    Schlegel, Patrick
    Berry, David A.
    Chhetri, Dinesh K.
    Duerr, Stephan
    Echternach, Matthias
    Johnson, Aaron M.
    Kniesburges, Stefan
    Kunduk, Melda
    Maryn, Youri
    Schuetzenberger, Anne
    Verguts, Monique
    Doellinger, Michael
    [J]. SCIENTIFIC DATA, 2020, 7 (01)