Stimulus-guided adaptive transformer network for retinal blood vessel segmentation in fundus images

被引:23
作者
Lin, Ji [1 ]
Huang, Xingru [1 ]
Zhou, Huiyu [2 ]
Wang, Yaqi [3 ]
Zhang, Qianni [1 ]
机构
[1] Queen Mary Univ London, Sch Elect Engn & Comp Sci, Mile End Rd, London E1 4NS, England
[2] Univ Leicester, Sch Informat, Univ Rd, Leicester LE1 7RH, England
[3] Commun Univ Zhejiang, Coll Media Engn, Hangzhou 310018, Peoples R China
关键词
Retinal blood vessel segmentation; Visual cortex; Stimulus-guided adaptive pooling transformer; Stimulus-guided adaptive feature fusion; Receptive field; GLOBAL PREVALENCE; RETINOPATHY; DISEASE; BURDEN;
D O I
10.1016/j.media.2023.102929
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Automated retinal blood vessel segmentation in fundus images provides important evidence to ophthalmologists in coping with prevalent ocular diseases in an efficient and non-invasive way. However, segmenting blood vessels in fundus images is a challenging task, due to the high variety in scale and appearance of blood vessels and the high similarity in visual features between the lesions and retinal vascular. Inspired by the way that the visual cortex adaptively responds to the type of stimulus, we propose a Stimulus-Guided Adaptive Transformer Network (SGAT-Net) for accurate retinal blood vessel segmentation. It entails a Stimulus-Guided Adaptive Module (SGA-Module) that can extract local-global compound features based on inductive bias and self-attention mechanism. Alongside a light-weight residual encoder (ResEncoder) structure capturing the relevant details of appearance, a Stimulus-Guided Adaptive Pooling Transformer (SGAP-Former) is introduced to reweight the maximum and average pooling to enrich the contextual embedding representation while suppressing the redundant information. Moreover, a Stimulus-Guided Adaptive Feature Fusion (SGAFF) module is designed to adaptively emphasize the local details and global context and fuse them in the latent space to adjust the receptive field (RF) based on the task. The evaluation is implemented on the largest fundus image dataset (FIVES) and three popular retinal image datasets (DRIVE, STARE, CHASEDB1). Experimental results show that the proposed method achieves a competitive performance over the other existing method, with a clear advantage in avoiding errors that commonly happen in areas with highly similar visual features. The sourcecode is publicly available at: https://github.com/Gins-07/SGAT.
引用
收藏
页数:14
相关论文
共 62 条
[1]   Detecting retinal vasculature as a key biomarker for deep Learning-based intelligent screening and analysis of diabetic and hypertensive retinopathy [J].
Arsalan, Muhammad ;
Haider, Adnan ;
Lee, Young Won ;
Park, Kang Ryoung .
EXPERT SYSTEMS WITH APPLICATIONS, 2022, 200
[2]   Expert-validated estimation of diagnostic uncertainty for deep neural networks in diabetic retinopathy detection [J].
Ayhan, Murat Seckin ;
Kuhlewein, Laura ;
Aliyeva, Gulnar ;
Inhoffen, Werner ;
Ziemssen, Focke ;
Berens, Philipp .
MEDICAL IMAGE ANALYSIS, 2020, 64
[3]   SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation [J].
Badrinarayanan, Vijay ;
Kendall, Alex ;
Cipolla, Roberto .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2017, 39 (12) :2481-2495
[4]   A Transformer-based Cascade Network with Boundary Enhancement Loss for Retinal Vessel Segmentation [J].
Cai, Binke ;
Ma, Liyan .
2022 26TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION (ICPR), 2022, :4292-4298
[5]  
Cao H., 2021, arXiv, DOI 10.48550/arXiv:2105.05537
[6]  
Chen BZ, 2022, Arxiv, DOI [arXiv:2107.05274, DOI 10.48550/ARXIV.2107.05274]
[7]  
Chen J., 2021, arXiv
[8]   Encoder-Decoder with Atrous Separable Convolution for Semantic Image Segmentation [J].
Chen, Liang-Chieh ;
Zhu, Yukun ;
Papandreou, George ;
Schroff, Florian ;
Adam, Hartwig .
COMPUTER VISION - ECCV 2018, PT VII, 2018, 11211 :833-851
[9]   Xception: Deep Learning with Depthwise Separable Convolutions [J].
Chollet, Francois .
30TH IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2017), 2017, :1800-1807
[10]   TransBridge: A Lightweight Transformer for Left Ventricle Segmentation in Echocardiography [J].
Deng, Kaizhong ;
Meng, Yanda ;
Gao, Dongxu ;
Bridge, Joshua ;
Shen, Yaochun ;
Lip, Gregory ;
Zhao, Yitian ;
Zheng, Yalin .
SIMPLIFYING MEDICAL ULTRASOUND, 2021, 12967 :63-72