An integrative multi-omics approach to characterize interactions between tuberculosis and diabetes mellitus

被引:1
|
作者
Vinhaes, Caian L. [1 ,2 ,3 ,4 ,5 ]
Fukutani, Eduardo R. [2 ,5 ,6 ]
Santana, Gabriel C. [1 ,2 ,7 ]
Arriaga, Maria B. [8 ]
Barreto-Duarte, Beatriz [1 ,2 ,5 ,7 ,9 ]
Araujo-Pereira, Mariana [1 ,2 ,5 ,10 ]
Maggitti-Bezerril, Mateus [2 ,5 ]
Andrade, Alice M. S. [1 ,2 ,5 ]
Figueiredo, Marina C. [8 ]
Milne, Ginger L. [11 ]
Rolla, Valeria C. [12 ]
Kristki, Afranio L. [9 ]
Cordeiro-Santos, Marcelo [13 ,14 ,15 ]
Sterling, Timothy R. [8 ]
Andrade, Bruno B. [1 ,2 ,3 ,5 ,7 ,8 ,10 ]
Queiroz, Artur T. L. [2 ,5 ,6 ]
机构
[1] Fundacao Oswaldo Cruz, Inst Goncalo Moniz, Lab Pesquisa Clin & Translac, BR-40296710 Salvador, Brazil
[2] Multinatl Org Network Sponsoring Translat & Epidem, BR-41810710 Salvador, Brazil
[3] Escola Bahiana Med & Saude Publ EBMSP, Programa Pos Grad Med & Saude Humana, BR-40290150 Salvador, Brazil
[4] Hosp Portugues Bahia, Dept Infectol, BR-40140901 Salvador, Brazil
[5] Inst Pesquisa Clin & Translac, Fac Tecnol & Ciencias, BR-41741590 Salvador, Brazil
[6] Fundacao Oswaldo Cruz, Inst Goncalo Moniz, Ctr Integracao Dados & Conhecimentos Saude, Salvador, Brazil
[7] Univ Salvador, Curso Med, Salvador, Brazil
[8] Vanderbilt Univ, Med Ctr, Dept Med, Div Infect Dis, Nashville, TN 37235 USA
[9] Univ Fed Rio De Janeiro, Programa Academ TB, Fac Med, Rio De Janeiro, Brazil
[10] Univ Fed Bahia, Fac Med, Salvador, Brazil
[11] Vanderbilt Univ, Div Clin Pharmacol, Dept Med, Sch Med, Nashville, TN USA
[12] Inst Nacl Infectol Evandro Chagas, Fiocruz, Rio De Janeiro, Brazil
[13] Fundacao Med Trop Doutor Heitor Vieira Dourado, Manaus, Brazil
[14] Univ Estado Amazonas, Programa Pos Grad Med Trop, Manaus, Brazil
[15] Univ Nilton Lins, Manaus, Brazil
关键词
URINARY METABOLITE; INTERFERON-GAMMA; INNATE IMMUNITY; PREVALENCE; RESISTANCE; MOLECULE; PGE(2); D-2;
D O I
10.1016/j.isci.2024.109135
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Tuberculosis -diabetes mellitus (TB -DM) is linked to a distinct inflammatory profile, which can be assessed using multi-omics analyses. Here, a machine learning algorithm was applied to multi -platform data, including cytokines and gene expression in peripheral blood and eicosanoids in urine, in a Brazilian multi -center TB cohort. There were four clinical groups: TB-DM(n = 24), TB only(n = 28), DM(HbA1c R 6.5%) only(n = 11), and a control group of close TB contacts who did not have TB or DM(n = 13). After cross -validation, baseline expression or abundance of MMP-28, LTE-4, 11-dTxB2, PGDM, FBXO6, SECTM1, and LINCO2009 differentiated the four patient groups. A distinct multi-omic-derived, dimensionally reduced, signature was associated with TB, regardless of glycemic status. SECTM1 and FBXO6 mRNA levels were positively correlated with sputum acid -fast bacilli grade in TB -DM. Values of the biomarkers decreased during the course of anti -TB therapy. Our study identified several markers associated with the pathophysiology of TB -DM that could be evaluated in future mechanistic investigations.
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页数:14
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