Mechanistic analysis of a novel membrane-interacting variable loop in the pleckstrin-homology domain critical for dynamin function

被引:8
|
作者
Khurana, Himani [1 ]
Baratam, Krishnakanth [2 ]
Bhattacharyya, Soumya [1 ]
Srivastava, Anand [2 ]
Pucadyil, Thomas J. [1 ]
机构
[1] Indian Inst Sci Educ & Res, Pune 411008, India
[2] Indian Inst Sci, Mol Biophys Unit, Bangalore 560012, Karnataka, India
关键词
structural modeling; biochemical reconstitution; nanotubes; membrane insertion and fission; BIN1; scaffolds; REAL-TIME ANALYSIS; STRUCTURAL INSIGHTS; FISSION; MUTATIONS; AMPHIPHYSIN; PLATFORM;
D O I
10.1073/pnas.2215250120
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Classical dynamins are best understood for their ability to generate vesicles by mem-brane fission. During clathrin-mediated endocytosis (CME), dynamin is recruited to the membrane through multivalent protein and lipid interactions between its proline-rich domain (PRD) with SRC Homology 3 (SH3) domains in endocytic proteins and its pleckstrin-homology domain (PHD) with membrane lipids. Variable loops (VL) in the PHD bind lipids and partially insert into the membrane thereby anchoring the PHD to the membrane. Recent molecular dynamics (MD) simulations reveal a novel VL4 that interacts with the membrane. Importantly, a missense muta-tion that reduces VL4 hydrophobicity is linked to an autosomal dominant form of Charcot-Marie-Tooth (CMT) neuropathy. We analyzed the orientation and function of the VL4 to mechanistically link data from simulations with the CMT neuropathy. Structural modeling of PHDs in the cryo-electron microscopy (cryo-EM) cryoEM map of the membrane-bound dynamin polymer confirms VL4 as a membrane -in-teracting loop. In assays that rely solely on lipid-based membrane recruitment, VL4 mutants with reduced hydrophobicity showed an acute membrane curvature -de-pendent binding and a catalytic defect in fission. Remarkably, in assays that mimic a physiological multivalent lipid-and protein-based recruitment, VL4 mutants were completely defective in fission across a range of membrane curvatures. Importantly, expression of these mutants in cells inhibited CME, consistent with the autosomal dominant phenotype associated with the CMT neuropathy. Together, our results emphasize the significance of finely tuned lipid and protein interactions for efficient dynamin function.
引用
收藏
页数:9
相关论文
共 3 条
  • [1] The pleckstrin-homology domain of dynamin is dispensable for membrane constriction and fission
    Dar, Srishti
    Pucadyil, Thomas J.
    MOLECULAR BIOLOGY OF THE CELL, 2017, 28 (01) : 152 - 160
  • [2] Dynamin-catalyzed membrane fission in the absence of a pleckstrin-homology domain
    Dar, S.
    Pucadyil, T.
    MOLECULAR BIOLOGY OF THE CELL, 2015, 26
  • [3] Membrane Insertion of the Pleckstrin Homology Domain Variable Loop 1 Is Critical for Dynamin-catalyzed Vesicle Scission
    Ramachandran, Rajesh
    Pucadyil, Thomas J.
    Liu, Ya-Wen
    Acharya, Sharmistha
    Leonard, Marilyn
    Lukiyanchuk, Vasyl
    Schmid, Sandra L.
    MOLECULAR BIOLOGY OF THE CELL, 2009, 20 (22) : 4630 - 4639